Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0662
         (721 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   3.8  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   5.1  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   5.1  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   5.1  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   5.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.7  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           22   6.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.7  

>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 23  VCFISCRGC*AWNLPDASRDVPN 91
           +C I C     W LP  S + PN
Sbjct: 292 ICHILCMSDLHWQLPHNSTNPPN 314


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 150 PSPLVYSTPYGCTHFIKKR 206
           P+P  ++T  GCT  ++K+
Sbjct: 432 PNPCTHTTTNGCTAELRKK 450


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 150 PSPLVYSTPYGCTHFIKKR 206
           P+P  ++T  GCT  ++K+
Sbjct: 418 PNPCTHTTTNGCTAELRKK 436


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 150 PSPLVYSTPYGCTHFIKKR 206
           P+P  ++T  GCT  ++K+
Sbjct: 452 PNPCTHTTTNGCTAELRKK 470


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 150 PSPLVYSTPYGCTHFIKKR 206
           P+P  ++T  GCT  ++K+
Sbjct: 401 PNPCTHTTTNGCTAELRKK 419


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +2

Query: 131 SQQRRASLTLGLLYTVWV 184
           S++RRA+ TLG++  V+V
Sbjct: 320 SKERRAARTLGVIMGVFV 337


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +2

Query: 131 SQQRRASLTLGLLYTVWV 184
           S++RRA+ TLG++  V+V
Sbjct: 320 SKERRAARTLGVIMGVFV 337


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = +2

Query: 470 YLHNTLRADRADRIDCITSRRNSSDQEEVCTRSGHNL 580
           +  N  RADR  R+ C          +  C  + H+L
Sbjct: 6   HFENEERADRHRRVTCDLLSFKGQVNDSACAANCHSL 42


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +2

Query: 131 SQQRRASLTLGLLYTVWV 184
           S++RRA+ TLG++  V+V
Sbjct: 320 SKERRAARTLGVIMGVFV 337


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,135
Number of Sequences: 438
Number of extensions: 3593
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)