Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0661
         (661 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    27   0.40 
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     26   0.92 
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   2.8  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   3.7  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   6.5  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   8.5  

>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 27.5 bits (58), Expect = 0.40
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = +2

Query: 542 VSCNNYKTFEGNLTTKPINGAIFYISIPEL 631
           +    + T++G+LTT P + A+ ++  P+L
Sbjct: 224 IDLTRFYTYKGSLTTPPCSEAVTWVVFPDL 253


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 26.2 bits (55), Expect = 0.92
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 71  PIYYCSQPTSGTCPDHPY*P 130
           P+YY S PT      HPY P
Sbjct: 175 PMYYPSYPTEANFQPHPYYP 194


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +2

Query: 2   NSARGRKETMPCLVNLIR*IHHAPIY 79
           N  RG + T+P ++N++    +AP++
Sbjct: 600 NGGRGNRNTVPLILNVLDVNDNAPVF 625


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 278 KIYRHVVCSVIQNLARAY 225
           K YRH    V+Q LARAY
Sbjct: 709 KFYRHNNVEVMQYLARAY 726


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 593 WV*LSSFLQRFCNCY 549
           W+  SSF Q+F +CY
Sbjct: 399 WLSCSSFFQQFFHCY 413


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +2

Query: 536 ECVSCNNYKTFEGNLTTKPI 595
           +C+   N+K++ G  T  P+
Sbjct: 11  QCIEVENFKSYRGRTTIGPL 30


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,405
Number of Sequences: 2352
Number of extensions: 17021
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)