Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0661
         (661 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   2.0  
S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               21   7.9  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.9  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   7.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.9  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 593 WV*LSSFLQRFCNCY 549
           W+  SSF Q+F +CY
Sbjct: 416 WLSCSSFFQQFFHCY 430


>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 204 VITPTNLYIKPVLLCSC 154
           VI  T+ ++ PV+ C+C
Sbjct: 14  VILITSYFVTPVMPCNC 30


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 70  ADILLFSAYKWNVSRPSLLADTKDTMDNTTT 162
           AD     A+  NVSR S  +D K  +DN  T
Sbjct: 302 ADFPFNFAFIKNVSRDSNSSDFKKLVDNWMT 332


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 473 PFQSELWRIVL*SNHLV 523
           PF + LW +V+ S H+V
Sbjct: 563 PFSNTLWILVMVSVHVV 579


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 70  ADILLFSAYKWNVSRPSLLADTKDTMDNTTT 162
           AD     A+  NVSR S  +D K  +DN  T
Sbjct: 302 ADFPFNFAFIKNVSRDSNSSDFKKLIDNWMT 332


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,490
Number of Sequences: 438
Number of extensions: 4452
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)