Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0660
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U18401-1|AAC47508.1|  428|Drosophila melanogaster testis-specifi...    29   4.7  
AY089457-1|AAL90195.1|  428|Drosophila melanogaster AT27014p pro...    29   4.7  
AE014297-1714|AAF54966.1|  428|Drosophila melanogaster CG9654-PA...    29   4.7  
AY262004-1|AAP57097.1|  833|Drosophila melanogaster TRP channel ...    29   6.2  
AJ252268-1|CAB66144.1| 1403|Drosophila melanogaster capicua prot...    29   6.2  
AE014297-2772|AAF55751.3| 1403|Drosophila melanogaster CG5067-PA...    29   6.2  
AE014296-2365|AAF49752.2|  833|Drosophila melanogaster CG5842-PA...    29   6.2  

>U18401-1|AAC47508.1|  428|Drosophila melanogaster
           testis-specific-RRM-protein protein.
          Length = 428

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -1

Query: 559 WLGGVSDYKSE-MVRKFVSQFGPTFS 485
           +LGG+ +Y  E +VR++ SQFGP  S
Sbjct: 139 FLGGLKEYHDENIVREYFSQFGPVAS 164


>AY089457-1|AAL90195.1|  428|Drosophila melanogaster AT27014p
           protein.
          Length = 428

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -1

Query: 559 WLGGVSDYKSE-MVRKFVSQFGPTFS 485
           +LGG+ +Y  E +VR++ SQFGP  S
Sbjct: 139 FLGGLKEYHDENIVREYFSQFGPVAS 164


>AE014297-1714|AAF54966.1|  428|Drosophila melanogaster CG9654-PA
           protein.
          Length = 428

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -1

Query: 559 WLGGVSDYKSE-MVRKFVSQFGPTFS 485
           +LGG+ +Y  E +VR++ SQFGP  S
Sbjct: 139 FLGGLKEYHDENIVREYFSQFGPVAS 164


>AY262004-1|AAP57097.1|  833|Drosophila melanogaster TRP channel
           protein nanchung protein.
          Length = 833

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -1

Query: 430 VCWLLNIRESWGQDILNVCL 371
           VCW LN+R + G+ IL++CL
Sbjct: 128 VCWDLNMRGAVGETILHLCL 147


>AJ252268-1|CAB66144.1| 1403|Drosophila melanogaster capicua
           protein.
          Length = 1403

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +1

Query: 457 IANSKQTYVMRKLVRI---GKRTYEPSPTCSHSRHRASLNKTSISNI*NSASWVFG 615
           IAN  Q    ++ V +    K    PSP   ++ + +S N TS SN  N+++W  G
Sbjct: 65  IANQSQQQQQQQPVAVPLDSKWKTTPSPVLYNANNNSSNNNTSSSNNNNNSNWEVG 120


>AE014297-2772|AAF55751.3| 1403|Drosophila melanogaster CG5067-PA
           protein.
          Length = 1403

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +1

Query: 457 IANSKQTYVMRKLVRI---GKRTYEPSPTCSHSRHRASLNKTSISNI*NSASWVFG 615
           IAN  Q    ++ V +    K    PSP   ++ + +S N TS SN  N+++W  G
Sbjct: 65  IANQSQQQQQQQPVAVPLDSKWKTTPSPVLYNANNNSSNNNTSSSNNNNNSNWEVG 120


>AE014296-2365|AAF49752.2|  833|Drosophila melanogaster CG5842-PA
           protein.
          Length = 833

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -1

Query: 430 VCWLLNIRESWGQDILNVCL 371
           VCW LN+R + G+ IL++CL
Sbjct: 128 VCWDLNMRGAVGETILHLCL 147


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,630,541
Number of Sequences: 53049
Number of extensions: 656040
Number of successful extensions: 1512
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1512
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)