Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0658
         (625 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5K628 Cluster: Putative uncharacterized protein; n=2; ...    33   4.2  
UniRef50_UPI00015A70B7 Cluster: zgc:158673; n=1; Danio rerio|Rep...    32   9.7  

>UniRef50_A5K628 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Plasmodium vivax
          Length = 4434

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +3

Query: 177 SKFI*KTYFLILIIILRNSYST*LF*ARTVNHLCVHCGQLYVS*KRYLRGRCDHDANF-- 350
           S F+ K   + ++ I  NS+++ LF     N L +HC  LY   ++  +G+  ++ N+  
Sbjct: 261 SYFVEKQRNINVLAIFTNSHTSFLFENEKTNLLNLHC--LYYGSRKKYQGKIKNENNYGI 318

Query: 351 FCRPRV 368
           FC PRV
Sbjct: 319 FCTPRV 324


>UniRef50_UPI00015A70B7 Cluster: zgc:158673; n=1; Danio rerio|Rep:
           zgc:158673 - Danio rerio
          Length = 754

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +2

Query: 41  FTFYV-NEVGGKI*RY-AKVTIPRGRSRGQKLVVHMTVERYDSLVDFFQIY 187
           FTF+  N V GK+  Y A +   RGR+R  K V    +ER+ S  +F+Q++
Sbjct: 679 FTFFFPNRVHGKVYPYEALLVTTRGRNRLPKDVDRARLERHLSAEEFYQVF 729


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,206,857
Number of Sequences: 1657284
Number of extensions: 10281292
Number of successful extensions: 19606
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19603
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)