Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0657
         (722 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002714-1|AAH02714.2|  260|Homo sapiens glycerophosphodiester p...    33   1.0  
AK026256-1|BAB15414.1|  256|Homo sapiens protein ( Homo sapiens ...    33   1.0  

>BC002714-1|AAH02714.2|  260|Homo sapiens glycerophosphodiester
           phosphodiesterase domain containing 3 protein.
          Length = 260

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 25/84 (29%), Positives = 39/84 (46%)
 Frame = -1

Query: 662 YIFLPTKFFFITTQKCLYNGLY*GNSHMLQSLDYGSFAY*RRRLTFSKFLIKSVEQRTQR 483
           +I +P KFFF      +    +  +   L  L     A   + L   K LI+ +E+R  +
Sbjct: 160 FIPIPEKFFFCFLPNIINRTYFPFSCSCLNQL----LAVVSKWLIMRKSLIRHLEERGVQ 215

Query: 482 N*QNIVYWCLGKLSVFQTLFSVAA 411
               +V+WCL + S F+  FSV A
Sbjct: 216 ----VVFWCLNEESDFEAAFSVGA 235


>AK026256-1|BAB15414.1|  256|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22603 fis, clone HSI04564. ).
          Length = 256

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 25/84 (29%), Positives = 39/84 (46%)
 Frame = -1

Query: 662 YIFLPTKFFFITTQKCLYNGLY*GNSHMLQSLDYGSFAY*RRRLTFSKFLIKSVEQRTQR 483
           +I +P KFFF      +    +  +   L  L     A   + L   K LI+ +E+R  +
Sbjct: 156 FIPIPEKFFFCFLPNIINRTYFPFSCSCLNQL----LAVVSKWLIMRKSLIRHLEERGVQ 211

Query: 482 N*QNIVYWCLGKLSVFQTLFSVAA 411
               +V+WCL + S F+  FSV A
Sbjct: 212 ----VVFWCLNEESDFEAAFSVGA 231


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,129,524
Number of Sequences: 237096
Number of extensions: 1974586
Number of successful extensions: 3371
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3371
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)