Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0656
         (642 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.1  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   3.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.6  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 184  NEIVPAVGLAYLILFAIIQINILR 255
            N +VP V    +I+ AII I +LR
Sbjct: 1609 NLVVPVVAAVLVIIVAIIVICVLR 1632


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 578 GHPQCISRGLFCH 540
           G   CI RGLFC+
Sbjct: 125 GDGNCIERGLFCN 137


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 293 KFNPFYLSTVTLSRKIFIW 237
           KF PF +S ++L   IF++
Sbjct: 231 KFEPFLISNISLVSLIFLF 249


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 364  YGPPDGKWLPSPMD 405
            Y   DGK+LPS +D
Sbjct: 2333 YRQGDGKYLPSDID 2346


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 398 GDGNHLPSGGP 366
           G GN+ P GGP
Sbjct: 530 GSGNNQPPGGP 540


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,659
Number of Sequences: 336
Number of extensions: 3469
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)