Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0656
(642 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 36 0.021
SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076) 35 0.065
SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1) 34 0.085
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 34 0.11
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 33 0.20
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 33 0.26
SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34) 33 0.26
SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082) 33 0.26
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 33 0.26
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 33 0.26
SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6) 32 0.34
SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3) 32 0.34
SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 32 0.34
SB_25119| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.4) 32 0.46
SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5) 31 0.80
SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8) 30 1.4
SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072) 30 1.4
SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8) 30 1.4
SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0) 30 1.4
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 30 1.4
SB_40765| Best HMM Match : DX (HMM E-Value=1.4) 30 1.4
SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0) 30 1.4
SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_22775| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_19530| Best HMM Match : EMI (HMM E-Value=3.5) 29 4.2
SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_58576| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16) 28 5.6
SB_48902| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_40983| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_40552| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_38731| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_34180| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 28 5.6
SB_33284| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_32643| Best HMM Match : Carla_C4 (HMM E-Value=9.9) 28 5.6
SB_30890| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_29924| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 28 5.6
SB_24244| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5) 28 5.6
SB_36764| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_36762| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_29800| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_24298| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_19305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_14496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_31047| Best HMM Match : CHORD (HMM E-Value=6.2) 28 7.4
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 28 7.4
SB_17428| Best HMM Match : Hydrolase (HMM E-Value=0.0047) 28 7.4
SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33) 28 7.4
SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 27 9.8
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = -1
Query: 621 RHRSRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRV 451
R R HP PL +S+ SF RTI WN L + +F E + FK + R+
Sbjct: 823 RKTRRSHPESFIPLSTSSASEHLSFFSRTIIQWNNLPALLFNEPCSLPIFKDKISRL 879
>SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
Length = 888
Score = 34.7 bits (76), Expect = 0.065
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -1
Query: 603 HPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTV 502
HP + + + T F+ SF+PR IRLWN L TV
Sbjct: 730 HPEHYDIPYARTNIFKYSFVPRAIRLWNSLEVTV 763
>SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1)
Length = 243
Score = 34.3 bits (75), Expect = 0.085
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = -1
Query: 615 RSRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSS 442
RSR + + S+ + SF PRTIR WN L S V E + FK VL S
Sbjct: 177 RSRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVV-ESSSIDSFKSSALPVLRS 233
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = -1
Query: 612 SRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLS 445
SR H L ++ + F SF PRTIR WN L + V D+ FK L +S
Sbjct: 1627 SRRHSRTYHQLQANILAFNYSFFPRTIRTWNLLPAEVV-NAADLPSFKSALAPAIS 1681
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -1
Query: 612 SRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGL 460
SR H L ++ + F SF PRTIR WN L + V D+ FK L
Sbjct: 1073 SRRHSRTYHQLQANILAFNYSFFPRTIRTWNLLPAEVV-NAADLPSFKSAL 1122
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 545 CHVPSGYGMSSPPRCFPSTMTCPSSNEAC 459
C P GY + +P RC S +C SS AC
Sbjct: 2147 CSCPQGYRLENPYRCVLSNASCASSEFAC 2175
>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = -1
Query: 612 SRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSS 442
SR + + S+ + SF PRTIR WN L S V E + FK VL S
Sbjct: 853 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFKSSALPVLRS 908
>SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 198
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = -1
Query: 612 SRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSS 442
SR + + S+ + SF PRTIR WN L S V E + FK VL S
Sbjct: 133 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFKSSALPVLRS 188
>SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 612 SRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTV 502
+R H + L S+ + + SF PR IR+WN L S V
Sbjct: 122 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 158
>SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)
Length = 837
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = -1
Query: 612 SRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSS 442
SR + + S+ + SF PRTIR WN L S V E + FK VL S
Sbjct: 772 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFKSSALPVLRS 827
>SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082)
Length = 506
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 612 SRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTV 502
+R H + L S+ + + SF PR IR+WN L S V
Sbjct: 441 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 477
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 612 SRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTV 502
+R H + L S+ + + SF PR IR+WN L S V
Sbjct: 1427 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 1463
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 612 SRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTV 502
+R H + L S+ + + SF PR IR+WN L S V
Sbjct: 387 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 423
>SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6)
Length = 231
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 603 HPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGL 460
H + L + T ++ SFLPR +RLWN L +V F GL
Sbjct: 184 HSEFYTILNARTDIYKYSFLPRALRLWNNLPQSVIDMRGCPEAFHSGL 231
>SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3)
Length = 243
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = -1
Query: 612 SRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSS 442
SR + + S+ + SF PRTIR WN L S V E + FK VL S
Sbjct: 178 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVV-ESSSIDSFKSSALPVLRS 233
>SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 152
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = -1
Query: 612 SRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSS 442
SR + + S+ + SF PRTIR WN L S V E + FK VL S
Sbjct: 87 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVV-ESSSIDSFKSSALPVLRS 142
>SB_25119| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.4)
Length = 443
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 612 SRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTV 502
+R H + L S+ + F SF PR IR WN L +
Sbjct: 262 TRRHSLSFQQLHSNILSFNYSFFPRAIRAWNLLPDNI 298
>SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5)
Length = 284
Score = 31.1 bits (67), Expect = 0.80
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 612 SRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSS 442
SR + + S+ + SF PRTIR WN L + V E + FK VL S
Sbjct: 219 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPAQVV-ESSSIDSFKSSALPVLRS 274
>SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 31.1 bits (67), Expect = 0.80
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 615 RSRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGL 460
R++ +Y P + + ++ SFLPR +RLWN L +V F GL
Sbjct: 182 RTQHSEFYTIPNARTDI-YKYSFLPRALRLWNNLPQSVIDMRGCPEAFHAGL 232
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 612 SRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFK 469
SR + + S+ + SF PRTIR WN L S V E + FK
Sbjct: 544 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFK 590
>SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 174
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -1
Query: 633 HRTARHRSRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGL 460
H+ R R+ + Y + + +F SF PRTIR WN L + + E + FKR L
Sbjct: 110 HQDLRTRNSHNFKYYQEKATKNKYFY-SFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 165
>SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072)
Length = 375
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -1
Query: 633 HRTARHRSRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGL 460
H+ R R+ + Y + + +F SF PRTIR WN L + + E + FKR L
Sbjct: 311 HQDLRTRNSHNFKYYQEKATKNKYFY-SFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 366
>SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 361
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -1
Query: 633 HRTARHRSRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGL 460
H+ R R+ + Y + + +F SF PRTIR WN L + + E + FKR L
Sbjct: 297 HQDLRTRNSHNFKYYQEKATKNKYFY-SFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 352
>SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 792
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 627 TARHRSR-VHPYYLEPLXSSTVHFQR-SFLPRTIRLWNELTS 508
T+R+ +R HP + ++ R S+ PRT++LWN L S
Sbjct: 722 TSRYNTRSYHPNNYRLFSTHNQNYYRNSYFPRTVKLWNSLPS 763
>SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 581
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -1
Query: 633 HRTARHRSRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGL 460
H+ R R+ + Y + + +F SF PRTIR WN L + + E + FKR L
Sbjct: 517 HQDLRTRNSHNFKYYQEKATKNKYFY-SFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 572
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 612 SRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTV 502
SR + + S+ + SF PRTIR WN L S V
Sbjct: 440 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEV 476
>SB_40765| Best HMM Match : DX (HMM E-Value=1.4)
Length = 278
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -1
Query: 633 HRTARHRSRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGL 460
H+ R R+ + Y + + +F SF PRTIR WN L + + E + FKR L
Sbjct: 214 HQDLRTRNSHNFKYYQEKATKNKYFY-SFFPRTIRHWNTLPNELV-ELDSIEHFKRDL 269
>SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 627 TARHRSR-VHPYYLEPLXSSTVHFQR-SFLPRTIRLWNELTS 508
T+R+ +R HP + ++ R S+ PRT++LWN L S
Sbjct: 225 TSRYNTRSYHPNNYRLFSTHNQNYYRNSYFPRTVKLWNSLPS 266
>SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 666
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -1
Query: 633 HRTARHRSRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGL 460
H+ R R+ + Y + + +F SF PRTIR WN L + + E + FKR L
Sbjct: 602 HQDLRTRNSHNFKYYQEKATKNKYFY-SFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 657
>SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -1
Query: 564 HFQRSFLPRTIRLWNELTS 508
+++ S+ PRT++LWN L S
Sbjct: 248 YYRNSYFPRTVKLWNSLPS 266
>SB_22775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 111 FDMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 154
>SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 612 SRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNELTSTVFP 496
S + Y L + F SF RTI +WN L VFP
Sbjct: 809 SACNSYQFSLLPAKINAFLFSFYSRTIPVWNALPQAVFP 847
>SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -1
Query: 603 HPYYLEPLXSSTVHFQRSFLPRTIRLWNEL-TSTV 502
HP + T F+ SF P IR+WN L ST+
Sbjct: 616 HPQRFALVSCKTNVFKESFFPHAIRMWNGLPVSTI 650
>SB_19530| Best HMM Match : EMI (HMM E-Value=3.5)
Length = 244
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -1
Query: 603 HPYYLEPLXSSTVHFQRSFLPRTIRLWNEL-TSTV 502
HP + T F+ SF P IR+WN L ST+
Sbjct: 198 HPQRFALVSCKTNVFKESFFPHAIRMWNGLPVSTI 232
>SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -1
Query: 630 RTARHRSRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNEL 514
RT + RS HP L T F+ SF RTI+ WN+L
Sbjct: 346 RTRQLRSS-HPDKFIELCPRTEAFKNSFFCRTIKEWNKL 383
>SB_58576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 111 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 154
>SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16)
Length = 453
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 405 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 448
>SB_48902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 111 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 154
>SB_40983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 111 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 154
>SB_40552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 111 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 154
>SB_38731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 111 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 154
>SB_34180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 111 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 154
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 474 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 517
>SB_33284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 215 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 258
>SB_32643| Best HMM Match : Carla_C4 (HMM E-Value=9.9)
Length = 159
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 111 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 154
>SB_30890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 111 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 154
>SB_29924| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 111 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 154
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 844 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 887
>SB_24244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 111 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 154
>SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 449 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 492
>SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5)
Length = 294
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -1
Query: 630 RTARHRSRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNEL 514
RT + RS HP L +T ++ SF RTI+ WN+L
Sbjct: 237 RTRQLRSS-HPDKFIELCPTTEAYKNSFFCRTIKEWNKL 274
>SB_36764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 111 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 154
>SB_36762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 111 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 154
>SB_29800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 111 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 154
>SB_24298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 111 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 154
>SB_19305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 111 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 154
>SB_14496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 561 FQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLG 427
F SF+PRTIR WN L S + F+ L S+Q G
Sbjct: 62 FGMSFIPRTIRTWN-LVSGDIAALPSLQLFQAAALPALRSKQAPG 105
>SB_31047| Best HMM Match : CHORD (HMM E-Value=6.2)
Length = 251
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 594 YLEPLXSSTVHFQRSFLPRTIRLWN 520
Y P S+ H ++SF P TIR WN
Sbjct: 203 YKVPPSSTDYHKKKSFFPPTIRDWN 227
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 198 RGRISISYPFCYHPNKYLAR*RHSREIK 281
R R+ + FC+H NK L R ++E+K
Sbjct: 113 RKRLVVGEAFCFHDNKVLCLDRCAKEVK 140
>SB_17428| Best HMM Match : Hydrolase (HMM E-Value=0.0047)
Length = 228
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = -1
Query: 576 SSTVHFQRSFLPRTIRLWNELTSTVFPEHYDMSFFKRGLWRVLSSRQRLGSALGIAEV 403
S T+H + S +PR+I +L T P + + K +L ++G + E+
Sbjct: 13 SGTIHIENSVIPRSIEALKKLRQTGLPLRFVTNTTKESKLSLLQRLTKIGFDIKADEI 70
>SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33)
Length = 609
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 633 HRTARHRSRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNEL 514
H+ R R+ + Y + + +F SF PRTIR WN L
Sbjct: 543 HQDLRTRNSHNFKYYQEKATKNKYFY-SFFPRTIRHWNTL 581
>SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1
Query: 552 SFLPRTIRLWNELTSTVFPEHYDMSFFKRGL 460
SF PRTIR WN L + + E + FKR L
Sbjct: 786 SFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 815
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -1
Query: 630 RTARHRSRVHPYYLEPLXSSTVHFQRSFLPRTIRLWNEL 514
RT + RS + ++E L T ++ SF RTI+ WN+L
Sbjct: 643 RTRQLRSSLPDKFIE-LCPRTEAYKNSFFCRTIKEWNKL 680
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,940,504
Number of Sequences: 59808
Number of extensions: 436729
Number of successful extensions: 972
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -