Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0656
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   3.6  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   6.2  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   8.2  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -2

Query: 446 AVGSGXXXXXXXLKSMGDGNHLPSGGPY 363
           AVG G         S G G  L SG PY
Sbjct: 675 AVGGGSGAGGGAGSSGGSGGGLASGSPY 702


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -2

Query: 569 QCISRGLFCHVPSGYGMSSPPRCFPSTMTCPSSNEACGEY 450
           +C++ G +   PS    + P    P+    P++ E  G+Y
Sbjct: 779 ECVTNGDYMLQPSNAPFTPPTDRTPTPPPLPATAEPMGDY 818


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2

Query: 29  FIYLFIYINLRD 64
           F+Y+F YINL++
Sbjct: 421 FVYIFAYINLQE 432


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,438
Number of Sequences: 2352
Number of extensions: 14794
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)