Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0653
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    29   0.17 
AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical prote...    23   6.3  
AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosens...    23   6.3  
AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosens...    23   6.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.4  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 28.7 bits (61), Expect = 0.17
 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = -3

Query: 578  EEDLTACYRLG---SNTNKPRPILVRFLSLRRCNE 483
            +E +TA  +LG   S+T  P P LV F S+  CNE
Sbjct: 1154 DERMTARPKLGRTPSDTGGPTPHLVTFQSIMECNE 1188


>AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -3

Query: 362 TTDGKIIVLLPDNKRSKIEQMFELQHLKTKFPSAQKAQGAPQSSGKSHD--EPKTAPKSA 189
           T +G+ +  LPD  ++  E+  E Q   ++   A   +  PQ   K  D  +P+   KS 
Sbjct: 55  TQEGRELKTLPDALKTNCEKCSEKQRTSSRKVIAHLEERKPQEWKKLLDKYDPEGIYKSK 114

Query: 188 AER 180
            E+
Sbjct: 115 FEK 117


>AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosensory
           protein CSP2 protein.
          Length = 122

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -3

Query: 362 TTDGKIIVLLPDNKRSKIEQMFELQHLKTKFPSAQKAQGAPQSSGKSHD--EPKTAPKSA 189
           T +G+ +  LPD  ++  E+  E Q   ++   A   +  PQ   K  D  +P+   KS 
Sbjct: 55  TQEGRELKTLPDALKTNCEKCSEKQRTSSRKVIAHLEERKPQEWKKLLDKYDPEGIYKSK 114

Query: 188 AER 180
            E+
Sbjct: 115 FEK 117


>AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosensory
           protein CSP1 protein.
          Length = 122

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -3

Query: 362 TTDGKIIVLLPDNKRSKIEQMFELQHLKTKFPSAQKAQGAPQSSGKSHD--EPKTAPKSA 189
           T +G+ +  LPD  ++  E+  E Q   ++   A   +  PQ   K  D  +P+   KS 
Sbjct: 55  TQEGRELKTLPDALKTNCEKCSEKQRTSSRKVIAHLEERKPQEWKKLLDKYDPEGIYKSK 114

Query: 188 AER 180
            E+
Sbjct: 115 FEK 117


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 392  RSHFGVKRCWTTDGKII 342
            R+HFG ++ WT D  +I
Sbjct: 1345 RNHFGKEKKWTFDKTLI 1361


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,536
Number of Sequences: 2352
Number of extensions: 13364
Number of successful extensions: 40
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)