Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0652
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.3  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   9.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   9.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.6  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   9.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   9.6  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/54 (22%), Positives = 24/54 (44%)
 Frame = -1

Query: 580 VPGPPSRAFVAFSVAYKLDPVDENVGVIYACVLLVGLYVLIIFEVINAYVRFIV 419
           +P      ++   + YKL  V + +   ++  LLV + V +   +  AY  + V
Sbjct: 223 IPQISDNLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLFQAYYLYYV 276


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/54 (22%), Positives = 24/54 (44%)
 Frame = -1

Query: 580 VPGPPSRAFVAFSVAYKLDPVDENVGVIYACVLLVGLYVLIIFEVINAYVRFIV 419
           +P      ++   + YKL  V + +   ++  LLV + V +   +  AY  + V
Sbjct: 223 IPQISDNLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLFQAYYLYYV 276


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 584 IRPIVSRITIHWAVVLQRRDWENP 655
           IRP+     I  ++ L RR  ENP
Sbjct: 484 IRPMYDAFLIDQSLALNRRRDENP 507


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 584 IRPIVSRITIHWAVVLQRRDWENP 655
           IRP+     I  ++ L RR  ENP
Sbjct: 484 IRPMYDAFLIDQSLALNRRRDENP 507


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 103 RLRPKNCHSF 74
           R+ PKNC SF
Sbjct: 205 RINPKNCASF 214


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 498 MTPTFSSTGSSLYA 539
           M P+FSST SS  A
Sbjct: 27  MVPSFSSTASSALA 40


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 498 MTPTFSSTGSSLYA 539
           M P+FSST SS  A
Sbjct: 86  MVPSFSSTASSALA 99


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 498 MTPTFSSTGSSLYA 539
           M P+FSST SS  A
Sbjct: 27  MVPSFSSTASSALA 40


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 498 MTPTFSSTGSSLYA 539
           M P+FSST SS  A
Sbjct: 86  MVPSFSSTASSALA 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,566
Number of Sequences: 336
Number of extensions: 3239
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)