Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0652
         (697 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g47690.1 68418.m05887 expressed protein                             29   2.9  
At1g70330.1 68414.m08091 equilibrative nucleoside transporter fa...    29   2.9  

>At5g47690.1 68418.m05887 expressed protein
          Length = 1638

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +2

Query: 389  KVQLKRS-DSLYYESDISINHLKDN*DVQSDEE 484
            KVQLK S D L+ ESD+  N   D+ D  SD+E
Sbjct: 1260 KVQLKASEDELHLESDMDKNVSLDSHDENSDQE 1292


>At1g70330.1 68414.m08091 equilibrative nucleoside transporter
           family protein contains similarity to SWISS-PROT:Q14542
           equilibrative nucleoside transporter 2 (Equilibrative
           nitrobenzylmercaptopurine riboside-insensitive
           nucleoside transporter, Equilibrative NBMPR-insensitive
           nucleoside transporter, Nucleoside transporter, ei-type,
           36 kDa nucleolar protein HNP36, Hydrophobic nucleolar
           protein, 36 kDa, Delayed-early response protein 12)
           [Homo sapiens]
          Length = 450

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 547 FSVAYKLDPVDENVGVIYACVLLVGLYVLIIF 452
           FS  Y    VD    VIY  V LV L+V+++F
Sbjct: 89  FSYLYPSTAVDRIFAVIYMLVALVCLFVIVVF 120


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,103,762
Number of Sequences: 28952
Number of extensions: 273806
Number of successful extensions: 591
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)