Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0651
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   6.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   6.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.2  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 422 EEDYVPHEVIRIVEPSY 472
           E+ Y+  EV+R+ +P Y
Sbjct: 337 EKKYILQEVVRVKKPHY 353


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 136 DLLDNYMVAEDPFLGPGKNQKLTLFKEIRSVKPDTM 243
           DL+ NY +A    + P  + K  +F  I   K +++
Sbjct: 298 DLIPNYYIAHFINIDPENHNKTEIFLNITGDKTNSV 333


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = -3

Query: 350 YTSITSWSFTMGKLSSTKRVQVSRKNSLPLQLTINFMVSGFTLRISLKRVSFWFL 186
           Y S    S+T+  + S  R+  +  NSL +   + F+     + ++L    F FL
Sbjct: 57  YFSFYITSYTLLSVYSLFRIATNENNSLVINKRLIFIECFVMMALTLIVTLFTFL 111


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = -3

Query: 350 YTSITSWSFTMGKLSSTKRVQVSRKNSLPLQLTINFMVSGFTLRISLKRVSFWFL 186
           Y S    S+T+  + S  R+  +  NSL +   + F+     + ++L    F FL
Sbjct: 57  YFSFYITSYTLLSVYSLFRIATNENNSLVINKRLIFIECFVMMALTLIVTLFTFL 111


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 369 PHAPTGATSSSLNTLLGGKKTTCP 440
           PH P  A   SL++ LGG  +  P
Sbjct: 72  PHGPPYAPHPSLSSGLGGGLSGMP 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,628
Number of Sequences: 336
Number of extensions: 3998
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)