Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0651
(613 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017166-1|AAH17166.1| 556|Homo sapiens glypican 4 protein. 29 9.8
AY358507-1|AAQ88871.1| 556|Homo sapiens glypican 4 protein. 29 9.8
AY052833-1|AAL11018.1| 556|Homo sapiens glypican-4 protein. 29 9.8
AL109623-1|CAB86664.2| 556|Homo sapiens glypican 4 protein. 29 9.8
AL034400-1|CAI42076.1| 556|Homo sapiens glypican 4 protein. 29 9.8
AF064826-1|AAC31899.1| 556|Homo sapiens glypican 4 protein. 29 9.8
AF030195-1|AAF22364.1| 552|Homo sapiens K-glypican precursor pr... 29 9.8
AF030186-1|AAC69991.1| 556|Homo sapiens glypican-4 protein. 29 9.8
>BC017166-1|AAH17166.1| 556|Homo sapiens glypican 4 protein.
Length = 556
Score = 29.5 bits (63), Expect = 9.8
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +1
Query: 193 QKLTLFKEIRSVKPDTMKLIVNWSGKEFLRETWTRFVEDSFPIVNDQ-EVMDVYLVPT*T 369
Q LFK++ V+ ++ N + +E L + W R +E F +VN Q D YL
Sbjct: 134 QNSELFKDL-FVELKRYYVVGNVNLEEMLNDFWARLLERMFRLVNSQYHFTDEYLECVSK 192
Query: 370 HTPQ--QVLQVPRSTRS*VGRRLRAPRS 447
+T Q VPR + V R A R+
Sbjct: 193 YTEQLKPFGDVPRKLKLQVTRAFVAART 220
>AY358507-1|AAQ88871.1| 556|Homo sapiens glypican 4 protein.
Length = 556
Score = 29.5 bits (63), Expect = 9.8
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +1
Query: 193 QKLTLFKEIRSVKPDTMKLIVNWSGKEFLRETWTRFVEDSFPIVNDQ-EVMDVYLVPT*T 369
Q LFK++ V+ ++ N + +E L + W R +E F +VN Q D YL
Sbjct: 134 QNSELFKDL-FVELKRYYVVGNVNLEEMLNDFWARLLERMFRLVNSQYHFTDEYLECVSK 192
Query: 370 HTPQ--QVLQVPRSTRS*VGRRLRAPRS 447
+T Q VPR + V R A R+
Sbjct: 193 YTEQLKPFGDVPRKLKLQVTRAFVAART 220
>AY052833-1|AAL11018.1| 556|Homo sapiens glypican-4 protein.
Length = 556
Score = 29.5 bits (63), Expect = 9.8
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +1
Query: 193 QKLTLFKEIRSVKPDTMKLIVNWSGKEFLRETWTRFVEDSFPIVNDQ-EVMDVYLVPT*T 369
Q LFK++ V+ ++ N + +E L + W R +E F +VN Q D YL
Sbjct: 134 QNSELFKDL-FVELKRYYVVGNVNLEEMLNDFWARLLERMFRLVNSQYHFTDEYLECVSK 192
Query: 370 HTPQ--QVLQVPRSTRS*VGRRLRAPRS 447
+T Q VPR + V R A R+
Sbjct: 193 YTEQLKPFGDVPRKLKLQVTRAFVAART 220
>AL109623-1|CAB86664.2| 556|Homo sapiens glypican 4 protein.
Length = 556
Score = 29.5 bits (63), Expect = 9.8
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +1
Query: 193 QKLTLFKEIRSVKPDTMKLIVNWSGKEFLRETWTRFVEDSFPIVNDQ-EVMDVYLVPT*T 369
Q LFK++ V+ ++ N + +E L + W R +E F +VN Q D YL
Sbjct: 134 QNSELFKDL-FVELKRYYVVGNVNLEEMLNDFWARLLERMFRLVNSQYHFTDEYLECVSK 192
Query: 370 HTPQ--QVLQVPRSTRS*VGRRLRAPRS 447
+T Q VPR + V R A R+
Sbjct: 193 YTEQLKPFGDVPRKLKLQVTRAFVAART 220
>AL034400-1|CAI42076.1| 556|Homo sapiens glypican 4 protein.
Length = 556
Score = 29.5 bits (63), Expect = 9.8
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +1
Query: 193 QKLTLFKEIRSVKPDTMKLIVNWSGKEFLRETWTRFVEDSFPIVNDQ-EVMDVYLVPT*T 369
Q LFK++ V+ ++ N + +E L + W R +E F +VN Q D YL
Sbjct: 134 QNSELFKDL-FVELKRYYVVGNVNLEEMLNDFWARLLERMFRLVNSQYHFTDEYLECVSK 192
Query: 370 HTPQ--QVLQVPRSTRS*VGRRLRAPRS 447
+T Q VPR + V R A R+
Sbjct: 193 YTEQLKPFGDVPRKLKLQVTRAFVAART 220
>AF064826-1|AAC31899.1| 556|Homo sapiens glypican 4 protein.
Length = 556
Score = 29.5 bits (63), Expect = 9.8
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +1
Query: 193 QKLTLFKEIRSVKPDTMKLIVNWSGKEFLRETWTRFVEDSFPIVNDQ-EVMDVYLVPT*T 369
Q LFK++ V+ ++ N + +E L + W R +E F +VN Q D YL
Sbjct: 134 QNSELFKDL-FVELKRYYVVGNVNLEEMLNDFWARLLERMFRLVNSQYHFTDEYLECVSK 192
Query: 370 HTPQ--QVLQVPRSTRS*VGRRLRAPRS 447
+T Q VPR + V R A R+
Sbjct: 193 YTEQLKPFGDVPRKLKLQVTRAFVAART 220
>AF030195-1|AAF22364.1| 552|Homo sapiens K-glypican precursor
protein.
Length = 552
Score = 29.5 bits (63), Expect = 9.8
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +1
Query: 193 QKLTLFKEIRSVKPDTMKLIVNWSGKEFLRETWTRFVEDSFPIVNDQ-EVMDVYLVPT*T 369
Q LFK++ V+ ++ N + +E L + W R +E F +VN Q D YL
Sbjct: 134 QNSELFKDL-FVELKRYYVVGNVNLEEMLNDFWARLLERMFRLVNSQYHFTDEYLECVSK 192
Query: 370 HTPQ--QVLQVPRSTRS*VGRRLRAPRS 447
+T Q VPR + V R A R+
Sbjct: 193 YTEQLKPFGDVPRKLKLQVTRAFVAART 220
>AF030186-1|AAC69991.1| 556|Homo sapiens glypican-4 protein.
Length = 556
Score = 29.5 bits (63), Expect = 9.8
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +1
Query: 193 QKLTLFKEIRSVKPDTMKLIVNWSGKEFLRETWTRFVEDSFPIVNDQ-EVMDVYLVPT*T 369
Q LFK++ V+ ++ N + +E L + W R +E F +VN Q D YL
Sbjct: 134 QNSELFKDL-FVELKRYYVVGNVNLEEMLNDFWARLLERMFRLVNSQYHFTDEYLECVSK 192
Query: 370 HTPQ--QVLQVPRSTRS*VGRRLRAPRS 447
+T Q VPR + V R A R+
Sbjct: 193 YTEQLKPFGDVPRKLKLQVTRAFVAART 220
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,605,640
Number of Sequences: 237096
Number of extensions: 2289631
Number of successful extensions: 5034
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5034
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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