Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0650
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    24   0.57 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   3.1  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   4.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   9.4  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 24.2 bits (50), Expect = 0.57
 Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +1

Query: 13  LH-LKHVRLQSTLYYDIKVLLSIGVFFVRSAVLLGV 117
           LH L++V    ++  D+KVL+SIG +   +A+L G+
Sbjct: 80  LHGLENVANLKSVNPDLKVLISIGGWNAGNAILNGI 115


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 122 FMLASPIPWGLVFSGESPATLAFLGFGRSI 211
           +++ SP+  GL     + +  AF GF R I
Sbjct: 195 YLVLSPLAKGLFHRAIAQSGCAFNGFARGI 224


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +1

Query: 112 GVTIHVSIAHTLGPG-VLGRITSD 180
           G+T++ S AH +G G +  R+ S+
Sbjct: 275 GLTVNKSTAHAVGVGNIYDRVLSE 298


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -2

Query: 238  DRRGKVGP 215
            DRRG++GP
Sbjct: 2121 DRRGRIGP 2128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,955
Number of Sequences: 336
Number of extensions: 2494
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)