Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0650
(449 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0677 + 10343089-10343604,10344316-10344462,10344539-103446... 45 3e-05
07_03_1773 - 29422660-29422806,29423103-29423201,29423811-294239... 40 0.001
01_06_1652 + 38918159-38918377,38918502-38919428 30 0.75
07_03_0518 + 19007793-19008722 29 1.3
08_01_0532 - 4611650-4612706,4613405-4613757 29 1.7
01_05_0291 - 20515206-20516262,20516961-20517313 29 1.7
04_04_1449 - 33683791-33683940,33684036-33684110,33684849-336849... 28 3.0
12_02_0624 + 21325082-21325292,21325679-21325896,21327462-213279... 27 7.0
03_06_0507 + 34404843-34404968,34405091-34405151,34405260-344052... 27 7.0
07_03_0419 - 17993478-17993777,17994045-17994195,17994799-179950... 27 9.2
04_04_1358 + 32869222-32869306,32869947-32870008,32870301-328703... 27 9.2
03_05_0200 - 21911260-21911322,21911655-21911705,21911756-219118... 27 9.2
03_02_1010 - 13194002-13194339,13194421-13194573,13194661-131948... 27 9.2
03_02_0924 + 12429764-12430120,12430562-12430637,12430803-124308... 27 9.2
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 27 9.2
02_01_0674 + 5020118-5020202,5020301-5020436,5021075-5021140,502... 27 9.2
01_05_0705 + 24424457-24424948,24425520-24425624,24426097-244262... 27 9.2
>03_02_0677 +
10343089-10343604,10344316-10344462,10344539-10344643,
10345411-10345509,10345662-10345814
Length = 339
Score = 44.8 bits (101), Expect = 3e-05
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = -2
Query: 448 ALKGGLALSTVNRPIKINVIAPPLYVMTTSTPEKTDGLKALQDGNRQNSREHHRSRWSL 272
A++ A N P+KI ++APPLYV+TT T +K G+ L D + + E + + L
Sbjct: 223 AMRKAEAAGNDNCPVKIKLVAPPLYVLTTQTLDKDQGISVLTDAIKACTAEIEKHKGKL 281
>07_03_1773 -
29422660-29422806,29423103-29423201,29423811-29423915,
29423990-29424136,29424436-29424954
Length = 338
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = -2
Query: 448 ALKGGLALSTVNRPIKINVIAPPLYVMTTSTPEKTDGLKALQDGNRQ--NSREHHRSRWS 275
A++ A + P+KI ++A PLYV+TT T +K G+ L + + + E H+ +
Sbjct: 224 AMRKAEAAGNKDCPVKIKLVAAPLYVLTTETLDKHQGISVLNNAIKACGETIEKHKGKLV 283
Query: 274 LQHSDGA*SGDSDR 233
++ + A S DR
Sbjct: 284 VKEAPRAVSEREDR 297
>01_06_1652 + 38918159-38918377,38918502-38919428
Length = 381
Score = 30.3 bits (65), Expect = 0.75
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = -3
Query: 339 VSKHYKTAIDKIQENITEAGGVFNIQMGPKVVTATDEAKLAPQMERPKPKNAKVAGDSPE 160
V+K YK + + G + + VV + +A Q P+P + P
Sbjct: 122 VAKQYKLGGTSSRSCPPDQGSLSLVAKNTLVVAQSSRIYVAFQFTAPQPTPYLIYAVGPS 181
Query: 159 NTRPQGMGD 133
NT P G GD
Sbjct: 182 NTNPSGNGD 190
>07_03_0518 + 19007793-19008722
Length = 309
Score = 29.5 bits (63), Expect = 1.3
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +2
Query: 113 GSPFMLASPIPWGLVFSGESPATLAFLGFGRSICGANFASSVAVTTLGPI*MLKTPP 283
GS FM A+ I V E PA L + GR + G A+ T+GP+ KTPP
Sbjct: 36 GSRFMEAAGIIVNTVAELE-PAVLEAIADGRCVPGRRVP---AIYTVGPVLSFKTPP 88
>08_01_0532 - 4611650-4612706,4613405-4613757
Length = 469
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -2
Query: 442 KGGLALSTVNRPIKINVIAPPLYVMTTSTPEKTDGLKALQDGN-RQNSREHHRSRWS 275
+GG N +++ P+Y+ S+P + + L+ DGN N R R W+
Sbjct: 125 RGGFMSYFGNHAQNSHLVGAPIYIADASSPPEVEILQGNDDGNGNGNVRTEKRILWT 181
>01_05_0291 - 20515206-20516262,20516961-20517313
Length = 469
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -2
Query: 442 KGGLALSTVNRPIKINVIAPPLYVMTTSTPEKTDGLKALQDGN-RQNSREHHRSRWS 275
+GG N +++ P+Y+ S+P + + L+ DGN N R R W+
Sbjct: 125 RGGFMSYFGNHAQNSHLVGAPIYIADASSPPEVEILQGNDDGNGNGNVRTEKRILWT 181
>04_04_1449 -
33683791-33683940,33684036-33684110,33684849-33684940,
33685020-33685106,33685460-33685615,33685706-33685804,
33686180-33686307,33687355-33687416
Length = 282
Score = 28.3 bits (60), Expect = 3.0
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -3
Query: 351 KRLTVSKHYKTAIDKIQENITEAGGVFNIQMGPKVVTATDEAKLAPQMERPK-PKNAKVA 175
KR ++ Y+T ID + I GVF+ G KV + + + PK + KVA
Sbjct: 36 KRASMEDFYETRIDSVDGQIIGLFGVFDGHGGAKVAEYVKQNLFSHLLRHPKFISDTKVA 95
Query: 174 GD 169
D
Sbjct: 96 ID 97
>12_02_0624 +
21325082-21325292,21325679-21325896,21327462-21327959,
21328008-21328049
Length = 322
Score = 27.1 bits (57), Expect = 7.0
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = -2
Query: 352 EKTDGLKALQDGNRQNSR-----EHHRSRWSLQHSDGA*SGDSDRRGKVGPTDGTPEA 194
E+ + K +DGN + +R W+ SD SGD DRR ++GP T E+
Sbjct: 27 EEEEESKRPRDGNDEEEELLTELSRYRRYWTDLWSDD--SGDIDRRTEIGPMRYTEES 82
>03_06_0507 +
34404843-34404968,34405091-34405151,34405260-34405296,
34405365-34405386,34405861-34405957,34406037-34406180,
34407034-34407173,34408205-34408255,34408347-34408429,
34408515-34408590,34408646-34408760,34409080-34409575,
34409682-34409895,34410000-34410070,34410527-34410695,
34410787-34410916,34411330-34411742,34411839-34412039
Length = 881
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -2
Query: 364 TSTPEKTDGLKALQDGNRQNSREHHRSRWSLQHSDGA*SGDSDRRGKVGPTDGTP 200
TS ++ D DGN+ S +H+++ + + S RRGK T P
Sbjct: 799 TSDGDRQDATPPTADGNQTLSSKHNQAGTPTKRKNRKDSHSEQRRGKAPKTKKEP 853
>07_03_0419 -
17993478-17993777,17994045-17994195,17994799-17995036,
17995133-17995343,17995440-17995618,17995735-17995833,
17996646-17997531
Length = 687
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 439 GGLALSTVNRPIKINVIAPPLYVMTTSTPEKTDG--LKALQD 320
GG A ++++V+ PPL+ + TP+ + G + LQD
Sbjct: 190 GGAAAVRWYTTVRMDVVTPPLFSLMQCTPDMSGGDCRQCLQD 231
>04_04_1358 +
32869222-32869306,32869947-32870008,32870301-32870393,
32870640-32870761,32873139-32873167,32873586-32873891,
32873977-32874035,32874148-32874279,32874414-32874455,
32874560-32875093,32875189-32875379,32875538-32876027,
32876273-32876335,32876704-32876805,32876895-32877215,
32877294-32877386,32877484-32877585,32877718-32877822,
32877933-32878066,32878429-32878612,32879226-32879357,
32879447-32879559,32879628-32879709,32880328-32881992
Length = 1746
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = -2
Query: 319 GNR--QNSREHHRSRWSLQHS 263
GNR + HHR RWSL H+
Sbjct: 107 GNRVAETMLSHHRGRWSLTHT 127
>03_05_0200 -
21911260-21911322,21911655-21911705,21911756-21911851,
21911947-21912045,21913213-21913526,21913621-21913696,
21913788-21915136,21915344-21915944
Length = 882
Score = 26.6 bits (56), Expect = 9.2
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = -3
Query: 342 TVSKHYKTAIDKIQENITEAGGVFNIQMGPKVVTATDEAKLAPQMERPKP--KNAKVAGD 169
T+ K K+Q+ I++ P VT+ D A +MER K++ +A
Sbjct: 142 TMGKPISLNAVKLQDTTLRREETEPIKLPPLEVTSHDSMSTAEKMERSAADVKHSTIAAG 201
Query: 168 SPENTRPQGMGDANMNGDPQQNGA 97
+ E + + A M P GA
Sbjct: 202 NTEEIVGENILYAEMENTPLSTGA 225
>03_02_1010 -
13194002-13194339,13194421-13194573,13194661-13194809,
13194932-13195184,13195282-13195469,13195684-13195841,
13196093-13196307,13196410-13196614
Length = 552
Score = 26.6 bits (56), Expect = 9.2
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = -3
Query: 252 KVVTATDEAKLAPQMERPKPKNAKVAGDSPENTRPQGMGDANMNGDPQQNGASHKK 85
K DEA+ P E+ K K + P+ Q A+ NGD ++NG KK
Sbjct: 470 KPSNVADEAE--PGTEKKKKKKKHKLEEEPQE---QEKSVAHANGDAEENGTPKKK 520
>03_02_0924 +
12429764-12430120,12430562-12430637,12430803-12430849,
12431850-12431962,12432056-12432129,12432258-12432353,
12432440-12432559,12432660-12432893,12433486-12433634,
12434145-12434301,12434387-12434542,12435359-12435735,
12435871-12436020,12437071-12437253,12437440-12437643,
12437869-12437975,12438253-12438406,12438796-12438917,
12439541-12439787
Length = 1040
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 343 DGLKALQDGNRQNSREHHRS 284
DG+ AL DG + + EHHRS
Sbjct: 912 DGVSALLDGLDEETFEHHRS 931
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = -3
Query: 255 PKVVTATDEAKLAPQMERPKPKNAKVAGDSPENTRPQGMGDANMNGDPQQNGAS 94
P ++T T P +P+P+ A VA P + NG+P Q A+
Sbjct: 26 PPLLTGTAVPPPPPAAAQPQPQQATVAEGDPPPPATGSAEEVAGNGEPPQPPAT 79
>02_01_0674 +
5020118-5020202,5020301-5020436,5021075-5021140,
5021219-5021290,5021362-5021433,5024242-5024301,
5024494-5024565,5024655-5024720,5024798-5024863,
5024945-5025273,5025713-5025969,5026213-5026484,
5026580-5026715,5026833-5026972,5027051-5027207,
5027476-5027634
Length = 714
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -3
Query: 216 PQMERPKPKNAKVAGDSPE-NTRPQGMGD 133
P+ R +P + + +GD+PE + P G GD
Sbjct: 254 PRRPRNRPSHPRGSGDAPEGSVSPAGQGD 282
>01_05_0705 +
24424457-24424948,24425520-24425624,24426097-24426207,
24426675-24426857,24427066-24427192,24427336-24427397,
24427638-24427724,24428703-24428789,24429210-24429323,
24429507-24429635,24429834-24429896,24430333-24430494,
24430611-24430729,24430786-24431794
Length = 949
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 191 LGFGRSICGANFASSVAVTTLGPI*MLKTPPASV 292
LGFG I G + S + TT GP + P ASV
Sbjct: 881 LGFGNPIGGRSTGSLSSSTTQGPPRLAPPPSASV 914
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,018,916
Number of Sequences: 37544
Number of extensions: 283644
Number of successful extensions: 905
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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