Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0649
         (342 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9BPR3 Cluster: Cuticle protein; n=1; Bombyx mori|Rep: ...    36   0.18 
UniRef50_UPI0000E23E60 Cluster: PREDICTED: hypothetical protein;...    33   1.2  
UniRef50_Q6MJ85 Cluster: Putative uncharacterized protein precur...    32   2.9  
UniRef50_Q4KDI4 Cluster: Putative uncharacterized protein; n=1; ...    32   2.9  
UniRef50_UPI00015B5272 Cluster: PREDICTED: hypothetical protein;...    31   3.8  
UniRef50_UPI0000DAE50E Cluster: hypothetical protein Rgryl_01000...    31   3.8  
UniRef50_Q9VPC0 Cluster: Serine/threonine-protein kinase PITSLRE...    31   3.8  
UniRef50_Q024H6 Cluster: Putative uncharacterized protein; n=1; ...    31   5.0  
UniRef50_A7B8S0 Cluster: Putative uncharacterized protein; n=1; ...    31   5.0  
UniRef50_A3JE24 Cluster: Putative uncharacterized protein; n=2; ...    31   5.0  
UniRef50_Q0UTD3 Cluster: Putative uncharacterized protein; n=1; ...    31   5.0  
UniRef50_UPI000018F680 Cluster: hypothetical protein Rm378p128; ...    31   6.7  
UniRef50_Q21JU6 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  
UniRef50_A6T0X9 Cluster: Taurine dioxygenase; n=47; Proteobacter...    30   8.8  
UniRef50_P29475 Cluster: Nitric-oxide synthase, brain; n=54; Coe...    30   8.8  

>UniRef50_Q9BPR3 Cluster: Cuticle protein; n=1; Bombyx mori|Rep:
           Cuticle protein - Bombyx mori (Silk moth)
          Length = 203

 Score = 35.9 bits (79), Expect = 0.18
 Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
 Frame = +1

Query: 31  AAKLVILLCALATARAGGLYGA--SYGAPIALYAGAPVI 141
           A KL +L+CA AT RAG +  A  ++ AP+A YA APV+
Sbjct: 2   AFKLAVLVCAFATVRAGFVPAAYTAHPAPVA-YAAAPVV 39


>UniRef50_UPI0000E23E60 Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 307

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 3/27 (11%)
 Frame = +3

Query: 111 YCIIRGS--PSHQKLRRPS-VCCILWA 182
           YCI+ G+  PSH+   R S VCC+LWA
Sbjct: 167 YCIVTGALPPSHRGASRASCVCCLLWA 193


>UniRef50_Q6MJ85 Cluster: Putative uncharacterized protein
           precursor; n=1; Bdellovibrio bacteriovorus|Rep: Putative
           uncharacterized protein precursor - Bdellovibrio
           bacteriovorus
          Length = 321

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
 Frame = -1

Query: 210 AGAEYAKYPWPK---VCSIRWGGVAFDDW 133
           A A YA  PW K    C  RWGGVA   W
Sbjct: 227 AAAIYADRPWAKERLYCKTRWGGVAVLSW 255


>UniRef50_Q4KDI4 Cluster: Putative uncharacterized protein; n=1;
           Pseudomonas fluorescens Pf-5|Rep: Putative
           uncharacterized protein - Pseudomonas fluorescens
           (strain Pf-5 / ATCC BAA-477)
          Length = 81

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 19  ITKWAAKLVILLCALATARAGGLYGASYGAPIALYAGA 132
           +T W+++L+ LL  L     G L G   GAP+ LY+ A
Sbjct: 45  VTPWSSRLLTLLSGLCVEHQGALLGCMPGAPV-LYSPA 81


>UniRef50_UPI00015B5272 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 81

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = +1

Query: 37  KLVILLCALATARAGGLYGA---SYGAPIALYAGAPV 138
           K VILLCA   A + G  GA   +Y AP+A  A  P+
Sbjct: 3   KFVILLCACIAAASAGYLGAAPIAYSAPLAYSAPLPI 39


>UniRef50_UPI0000DAE50E Cluster: hypothetical protein
           Rgryl_01000529; n=1; Rickettsiella grylli|Rep:
           hypothetical protein Rgryl_01000529 - Rickettsiella
           grylli
          Length = 907

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 25  KWAAKLVILLCALATARAGGLYGASYGAPIALYAGAPVIKS 147
           KWA     ++  + T    G  GA+ GAP+    GAP I S
Sbjct: 47  KWADLASCVIRIITTGTLLGATGATVGAPVGAVVGAPTISS 87


>UniRef50_Q9VPC0 Cluster: Serine/threonine-protein kinase PITSLRE;
           n=33; Eukaryota|Rep: Serine/threonine-protein kinase
           PITSLRE - Drosophila melanogaster (Fruit fly)
          Length = 952

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 74  APADFTEHHMGHLLHYTREPQSSKATPP 157
           A A + +HH+GH  HY + PQ  +   P
Sbjct: 104 AAAAYAKHHLGHAYHYPQPPQQQQQPLP 131


>UniRef50_Q024H6 Cluster: Putative uncharacterized protein; n=1;
            Solibacter usitatus Ellin6076|Rep: Putative
            uncharacterized protein - Solibacter usitatus (strain
            Ellin6076)
          Length = 866

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 27/84 (32%), Positives = 39/84 (46%)
 Frame = +1

Query: 1    EFGTRDITKWAAKLVILLCALATARAGGLYGASYGAPIALYAGAPVIKSXXXXXXXXXFG 180
            EFG R +   A +  IL   L  + A G+ G + G P+ALYA A  +++         F 
Sbjct: 773  EFGVR-LALGAQRTNILAMILRESAALGIAGIAIGVPLALYA-AGAMRALLADVTVSDF- 829

Query: 181  PGVLSILCTSLLRILWTSLLSICR 252
            P   + +   LL  L +SLL   R
Sbjct: 830  PTYAAAITLCLLMTLASSLLPAIR 853


>UniRef50_A7B8S0 Cluster: Putative uncharacterized protein; n=1;
           Actinomyces odontolyticus ATCC 17982|Rep: Putative
           uncharacterized protein - Actinomyces odontolyticus ATCC
           17982
          Length = 439

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 21/65 (32%), Positives = 27/65 (41%)
 Frame = +1

Query: 4   FGTRDITKWAAKLVILLCALATARAGGLYGASYGAPIALYAGAPVIKSXXXXXXXXXFGP 183
           +G R I  W  + VILL       AG L+ A+  A  A Y GA +            FG 
Sbjct: 60  WGRRSIA-WGRRRVILLALFLALTAGTLFSAAVWARAARYIGAFLAAGAIMAARGPFFGA 118

Query: 184 GVLSI 198
            V +I
Sbjct: 119 AVAAI 123


>UniRef50_A3JE24 Cluster: Putative uncharacterized protein; n=2;
           Marinobacter sp. ELB17|Rep: Putative uncharacterized
           protein - Marinobacter sp. ELB17
          Length = 399

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +1

Query: 25  KWAAKLVILLCALATARAGGLYGASYGAPIAL 120
           +WA  L+++L A   A+A G +G +YG  +++
Sbjct: 9   RWALPLIVVLAAFMIAKAIGFFGIAYGPVMSI 40


>UniRef50_Q0UTD3 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 612

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 211 LLRILWTSLLSICRTSLLRHMLQLFI*PTLGFPSTRATSPLA 336
           L+R+ WT +++I   SL+ H    F+ P L F    A  PL+
Sbjct: 356 LIRLAWTCVVTIVALSLISHKEVRFLYPLLPFLHILAAGPLS 397


>UniRef50_UPI000018F680 Cluster: hypothetical protein Rm378p128;
           n=1; Rhodothermus phage RM378|Rep: hypothetical protein
           Rm378p128 - Bacteriophage RM 378
          Length = 416

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -2

Query: 110 GAPYDAP*SPPARAVAKAHRSITNLAAHFVISLVPN 3
           G P D+  +PP   VAK H +I NL     +S+V N
Sbjct: 305 GFPIDS--NPPVGGVAKLHENIANLILDMTLSMVDN 338


>UniRef50_Q21JU6 Cluster: Putative uncharacterized protein; n=1;
           Saccharophagus degradans 2-40|Rep: Putative
           uncharacterized protein - Saccharophagus degradans
           (strain 2-40 / ATCC 43961 / DSM 17024)
          Length = 303

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +1

Query: 46  ILLCALATARAGGLY--GASYGAPIALYAGAPV 138
           +LLC L    AGGL+  GA++ API L AG PV
Sbjct: 132 VLLCLLCFF-AGGLFLEGAAWIAPIVLVAGLPV 163


>UniRef50_A6T0X9 Cluster: Taurine dioxygenase; n=47;
           Proteobacteria|Rep: Taurine dioxygenase -
           Janthinobacterium sp. (strain Marseille) (Minibacterium
           massiliensis)
          Length = 297

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 59  LWRPLAPADFTEHHMGHLLHYTREPQSSKATPPQRM 166
           L RPL  ADF+  H  HL H+    +  + TP Q++
Sbjct: 35  LTRPLDDADFSRVHQAHLDHHLLVFRDQQITPAQQI 70


>UniRef50_P29475 Cluster: Nitric-oxide synthase, brain; n=54;
            Coelomata|Rep: Nitric-oxide synthase, brain - Homo
            sapiens (Human)
          Length = 1434

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 114  CIIRGSPSHQKLRRPSVCCILWARGT 191
            C +RG+PS    R P V CIL   GT
Sbjct: 1231 CFVRGAPSFHLPRNPQVPCILVGPGT 1256


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 343,889,665
Number of Sequences: 1657284
Number of extensions: 6160388
Number of successful extensions: 17306
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17293
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10275329640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)