BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0649 (342 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 25 0.16 L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 25 0.16 AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 0.87 AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 23 0.87 AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 21 2.6 DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 21 4.6 EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 20 8.1 AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 20 8.1 AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 20 8.1 >X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. Length = 524 Score = 25.4 bits (53), Expect = 0.16 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = -1 Query: 117 CNRCPI*CSVKSAGASGRQSAQKYYQLSCPFC 22 CN+C C KS S +S Y+ SC C Sbjct: 261 CNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDC 292 >L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein protein. Length = 69 Score = 25.4 bits (53), Expect = 0.16 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = -1 Query: 117 CNRCPI*CSVKSAGASGRQSAQKYYQLSCPFC 22 CN+C C KS S +S Y+ SC C Sbjct: 19 CNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDC 50 >AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain transcription factor Prothoraxlessprotein. Length = 323 Score = 23.0 bits (47), Expect = 0.87 Identities = 11/40 (27%), Positives = 14/40 (35%) Frame = +2 Query: 68 PLAPADFTEHHMGHLLHYTREPQSSKATPPQRMLHTLGQG 187 PL HHMGH + Q M++ QG Sbjct: 156 PLTTQSMNNHHMGHHMQEQHPQHHQPHHQQQHMMYGGQQG 195 >AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless protein. Length = 325 Score = 23.0 bits (47), Expect = 0.87 Identities = 11/40 (27%), Positives = 14/40 (35%) Frame = +2 Query: 68 PLAPADFTEHHMGHLLHYTREPQSSKATPPQRMLHTLGQG 187 PL HHMGH + Q M++ QG Sbjct: 158 PLTTQSMNNHHMGHHMQEQHPQHHQPHHQQQHMMYGGQQG 197 >AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 protein protein. Length = 371 Score = 21.4 bits (43), Expect = 2.6 Identities = 11/37 (29%), Positives = 16/37 (43%) Frame = +3 Query: 222 TLDQPTQHMPHQLTPAYAPAFYLTYAGFPVYKSYFAP 332 T PT+ + +PA AP T G P + +P Sbjct: 197 TTTSPTKVKASKASPAAAPRSVATPTGIPTPSTSASP 233 >DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. Length = 314 Score = 20.6 bits (41), Expect = 4.6 Identities = 7/35 (20%), Positives = 18/35 (51%) Frame = +3 Query: 225 LDQPTQHMPHQLTPAYAPAFYLTYAGFPVYKSYFA 329 +++ +++ Q Y P + Y +PVY +++ Sbjct: 237 VNERKENLTCQPAVPYVPFYRYCYRPYPVYNQWWS 271 >EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxylase protein. Length = 532 Score = 19.8 bits (39), Expect = 8.1 Identities = 8/24 (33%), Positives = 12/24 (50%) Frame = +3 Query: 204 HQPT*DTLDQPTQHMPHQLTPAYA 275 H P D + + HMP P++A Sbjct: 352 HTPEPDCIHELLGHMPLLADPSFA 375 >AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. Length = 790 Score = 19.8 bits (39), Expect = 8.1 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = -1 Query: 75 ASGRQSAQKYYQLS 34 A GR+ KYY+L+ Sbjct: 519 ALGREEQAKYYELA 532 >AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. Length = 682 Score = 19.8 bits (39), Expect = 8.1 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = -1 Query: 75 ASGRQSAQKYYQLS 34 A GR+ KYY+L+ Sbjct: 411 ALGREEQAKYYELA 424 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 80,264 Number of Sequences: 336 Number of extensions: 1555 Number of successful extensions: 11 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11 length of database: 122,585 effective HSP length: 50 effective length of database: 105,785 effective search space used: 6664455 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 38 (20.3 bits)
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