BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0649 (342 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_01_0186 + 1454533-1454710,1455299-1455420,1455508-1455806,145... 29 0.72 05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732,582... 29 1.3 08_02_1478 - 27386280-27387046,27388154-27388201,27388631-27388724 27 2.9 12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626... 27 3.9 07_01_1006 + 8528508-8529285,8529376-8529544,8530179-8530445,853... 27 5.1 01_05_0464 - 22470963-22472291 26 6.7 09_04_0279 - 16349156-16349788,16352409-16353344 26 8.9 09_04_0278 + 16333261-16334172,16334900-16335532 26 8.9 >06_01_0186 + 1454533-1454710,1455299-1455420,1455508-1455806, 1455846-1455933,1456015-1456096,1457130-1457242 Length = 293 Score = 29.5 bits (63), Expect = 0.72 Identities = 13/34 (38%), Positives = 15/34 (44%) Frame = +2 Query: 56 ALWRPLAPADFTEHHMGHLLHYTREPQSSKATPP 157 A WR A AD HH H L + P + PP Sbjct: 4 AYWRYAAAADAARHHHHHQLPLSAAPAAGMPAPP 37 >05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732, 5828821-5828907,5828981-5829583,5829680-5829844, 5829941-5830235,5830320-5830534,5830621-5830926, 5831200-5831263,5831384-5831623,5831756-5831853 Length = 1474 Score = 28.7 bits (61), Expect = 1.3 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +1 Query: 16 DITKWAAKLVILLCALATARAG 81 D+ W LV+LLC RAG Sbjct: 165 DVAAWGVSLVLLLCVFVVGRAG 186 >08_02_1478 - 27386280-27387046,27388154-27388201,27388631-27388724 Length = 302 Score = 27.5 bits (58), Expect = 2.9 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +1 Query: 43 VILLCALATARAGGLYGASYGAPIALY 123 V+L C R G L+G YG P A++ Sbjct: 102 VVLTCVDCFLRGGSLHGFEYGVPPAVF 128 >12_02_0973 + 24959440-24959451,24959962-24962195,24962539-24962653, 24963146-24963943,24964140-24964422,24964500-24964951, 24965744-24965870,24965950-24966074,24966188-24966858, 24966976-24967093,24967177-24967293,24967564-24967658, 24968152-24968303,24968858-24968913,24969001-24969218, 24969842-24970239,24970345-24970628,24970730-24970836, 24970882-24970968,24971729-24971990,24972228-24972503, 24973197-24973254,24973437-24973756,24973889-24973999, 24974183-24974350,24974494-24974622,24974731-24974820, 24974934-24975040,24975133-24975281,24975584-24975666, 24975749-24975844,24975957-24976079,24976180-24976263, 24976371-24976511,24976652-24976951,24977386-24977453, 24977540-24977642,24979363-24979524,24979613-24981230, 24981270-24981661,24981689-24981991,24982078-24982161, 24982296-24982448,24982678-24982841,24982915-24983062, 24983209-24983331,24983409-24983496,24983686-24983867 Length = 4177 Score = 27.1 bits (57), Expect = 3.9 Identities = 13/52 (25%), Positives = 24/52 (46%) Frame = +2 Query: 62 WRPLAPADFTEHHMGHLLHYTREPQSSKATPPQRMLHTLGQGYLAYSAPAYL 217 W+ A D + +LH+++ P KA P R+ + L + + Y +L Sbjct: 2284 WKQFASVDVIQETASFVLHFSKPP---KAALPYRIENCLNEASIMYFQKTFL 2332 >07_01_1006 + 8528508-8529285,8529376-8529544,8530179-8530445, 8530533-8530878,8530964-8531101,8531197-8531322, 8531422-8531634,8531721-8531863,8531891-8532009, 8532099-8532295,8532379-8532729,8532811-8533395 Length = 1143 Score = 26.6 bits (56), Expect = 5.1 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = -1 Query: 174 VCSIRWGGVAFDDW 133 + +RW GVA DDW Sbjct: 970 ILEMRWSGVAIDDW 983 >01_05_0464 - 22470963-22472291 Length = 442 Score = 26.2 bits (55), Expect = 6.7 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 6/39 (15%) Frame = +3 Query: 225 LDQP-TQHMP--HQL---TPAYAPAFYLTYAGFPVYKSY 323 +DQP T HMP HQL P Y PA +T + P Y Sbjct: 142 VDQPSTSHMPYQHQLPQFAPTYTPAIPITPSLMPPISHY 180 >09_04_0279 - 16349156-16349788,16352409-16353344 Length = 522 Score = 25.8 bits (54), Expect = 8.9 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +3 Query: 252 HQLTPAYAPAFYLTYAGFPV 311 H+L+ Y P YL + FPV Sbjct: 59 HELSRRYGPLVYLRFGSFPV 78 >09_04_0278 + 16333261-16334172,16334900-16335532 Length = 514 Score = 25.8 bits (54), Expect = 8.9 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = +3 Query: 252 HQLTPAYAPAFYLTYAGFPV 311 H L+ Y P YL + FPV Sbjct: 60 HNLSKKYGPLMYLRFGSFPV 79 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,771,822 Number of Sequences: 37544 Number of extensions: 185058 Number of successful extensions: 538 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 529 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 538 length of database: 14,793,348 effective HSP length: 73 effective length of database: 12,052,636 effective search space used: 482105440 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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