BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0649
(342 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 29 0.036
AF080565-1|AAC31945.1| 324|Anopheles gambiae Antennapedia homeo... 23 2.4
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 23 3.1
EF382662-1|ABN54495.1| 178|Anopheles gambiae CPF family cuticle... 23 4.1
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 4.1
AY324312-1|AAQ89697.1| 158|Anopheles gambiae insulin-like pepti... 22 5.5
AY324311-1|AAQ89696.1| 158|Anopheles gambiae insulin-like pepti... 22 5.5
Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protei... 22 7.2
AY752909-1|AAV30083.1| 92|Anopheles gambiae peroxidase 14 prot... 22 7.2
CR954257-7|CAJ14158.1| 284|Anopheles gambiae signal sequence re... 21 9.6
AF513636-1|AAM53608.1| 222|Anopheles gambiae glutathione S-tran... 21 9.6
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 21 9.6
AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-spe... 21 9.6
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 21 9.6
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 21 9.6
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 21 9.6
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 21 9.6
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 21 9.6
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 21 9.6
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 29.5 bits (63), Expect = 0.036
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 89 TEHHMGHLLHYTREPQSSKATPPQRMLHTLGQGYLAYSA 205
T +H G+L + + K+ PP+ ++HT G G+L SA
Sbjct: 818 TINHKGNL----NDTEVQKSLPPKFLIHTFGNGFLMCSA 852
>AF080565-1|AAC31945.1| 324|Anopheles gambiae Antennapedia homeotic
protein protein.
Length = 324
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +2
Query: 92 EHHMGHLLHYTREPQSSKATPPQRMLHTLGQG 187
+HHMGH P+ TP ++T G
Sbjct: 162 QHHMGHSQGQECYPEQVHQTPQHMAMYTNAGG 193
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 23.0 bits (47), Expect = 3.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 2 NSARGI*QNGQLSW*YFCALWRPLAPADFTEHHMGHLL 115
N RGI Q S +FC PL+ + + G+LL
Sbjct: 662 NIRRGIFQGDTFSTLWFCLAMNPLSRTLNQQCNFGYLL 699
>EF382662-1|ABN54495.1| 178|Anopheles gambiae CPF family cuticle
protein protein.
Length = 178
Score = 22.6 bits (46), Expect = 4.1
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 31 AAKLVILLCALATARAGGLYGASYGAPIA 117
A K VIL +A AGG S AP A
Sbjct: 2 AFKFVILAALVAAVSAGGPAAYSIAAPSA 30
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 22.6 bits (46), Expect = 4.1
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +3
Query: 129 SPSHQKLRRPSVCCILWARGT*HTLHQPT*DTLDQPTQHMPHQLTPAYA 275
S S Q+ R P H L QP PTQ P PA A
Sbjct: 901 SSSSQQHRGPGAAAATGPPPPTHRLEQPPQVVAAAPTQQQPLPPAPAAA 949
>AY324312-1|AAQ89697.1| 158|Anopheles gambiae insulin-like peptide
5 precursor protein.
Length = 158
Score = 22.2 bits (45), Expect = 5.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2
Query: 284 KSWSICRSKLVRHM 243
+S S CR KL+RH+
Sbjct: 46 ESHSRCREKLIRHL 59
>AY324311-1|AAQ89696.1| 158|Anopheles gambiae insulin-like peptide
5 precursor protein.
Length = 158
Score = 22.2 bits (45), Expect = 5.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2
Query: 284 KSWSICRSKLVRHM 243
+S S CR KL+RH+
Sbjct: 46 ESHSRCREKLIRHL 59
>Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protein
precursor protein.
Length = 260
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 28 WAAKLVILLCALATARAGGLYGAS 99
W A +LL L+ AGG Y +S
Sbjct: 4 WIACATLLLVVLSGVSAGGKYCSS 27
>AY752909-1|AAV30083.1| 92|Anopheles gambiae peroxidase 14
protein.
Length = 92
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 79 GGLYGASYGAPIALYAGAP 135
GGL+ A AP+A G P
Sbjct: 70 GGLWWAGLAAPVAARHGEP 88
>CR954257-7|CAJ14158.1| 284|Anopheles gambiae signal sequence
receptor protein.
Length = 284
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 110 GAPYDAP*SPPARAVAKAH 54
GAP +P P + AKAH
Sbjct: 266 GAPKSSPKQSPRQRKAKAH 284
>AF513636-1|AAM53608.1| 222|Anopheles gambiae glutathione
S-transferase D6 protein.
Length = 222
Score = 21.4 bits (43), Expect = 9.6
Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = +2
Query: 143 KATPPQRMLHTLG---QGYLAYSAPAYLGYFGXXXXXXXXXXXXGICSSFLFNLRWVS 307
+A QR+ + +G + Y P +G G G+ SFL RW +
Sbjct: 97 RAKVNQRLFYDIGTLMRSVTTYYHPILMGGEGKLEDFKKVQDAVGVLDSFLSASRWTA 154
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 68 PLAPADFTEHHMGHLLHYTREPQSSKATP 154
P+A A HH + HY+ P + A P
Sbjct: 170 PVAHATVQHHHAAPIAHYS-APIAHHAAP 197
>AF043440-1|AAC05665.1| 234|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 234
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 68 PLAPADFTEHHMGHLLHYTREPQSSKATP 154
P+A A HH + HY+ P + A P
Sbjct: 166 PVAHATVQHHHAAPIAHYS-APIAHHAAP 193
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 68 PLAPADFTEHHMGHLLHYTREPQSSKATP 154
P+A A HH + HY+ P + A P
Sbjct: 178 PVAHATVQHHHAAPIAHYS-APIAHHAAP 205
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 68 PLAPADFTEHHMGHLLHYTREPQSSKATP 154
P+A A HH + HY+ P + A P
Sbjct: 178 PVAHATVQHHHAAPIAHYS-APIAHHAAP 205
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 68 PLAPADFTEHHMGHLLHYTREPQSSKATP 154
P+A A HH + HY+ P + A P
Sbjct: 202 PVAHATVQHHHAAPIAHYS-APIAHHAAP 229
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 68 PLAPADFTEHHMGHLLHYTREPQSSKATP 154
P+A A HH + HY+ P + A P
Sbjct: 170 PVAHATVQHHHAAPIAHYS-APIAHHAAP 197
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 68 PLAPADFTEHHMGHLLHYTREPQSSKATP 154
P+A A HH + HY+ P + A P
Sbjct: 178 PVAHATVQHHHAAPIAHYS-APIAHHAAP 205
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 68 PLAPADFTEHHMGHLLHYTREPQSSKATP 154
P+A A HH + HY+ P + A P
Sbjct: 170 PVAHATVQHHHAAPIAHYS-APIAHHAAP 197
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 346,233
Number of Sequences: 2352
Number of extensions: 6254
Number of successful extensions: 23
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -