Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0647
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            28   0.22 
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    27   0.50 
AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    25   1.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   6.1  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   6.1  
CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase ...    23   8.1  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 28.3 bits (60), Expect = 0.22
 Identities = 15/80 (18%), Positives = 36/80 (45%)
 Frame = +3

Query: 153  PSGLGCKQLGDIHPYPLLPRHNRLRIRLVYERKRALASQQRTKGRSN*RTETRRQDQQSR 332
            P G          P PL    + ++ + ++  ++    QQ+ + +   + + ++Q QQ +
Sbjct: 1268 PQGRSTDYHATQQPLPLPGLASEMQPQQLHRSQQQQQQQQQQQQQQQQQQQQQQQQQQHQ 1327

Query: 333  PEESGSRCARRSPAETAEPN 392
            P  + ++    +P  T+ PN
Sbjct: 1328 PPSTQAQLRPSAPLNTSPPN 1347


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 27.1 bits (57), Expect = 0.50
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +3

Query: 69  CGTGWPQATGHRVGHVQHDLRYRRRSHSPSGLGCKQLGDIHPYPLLPR 212
           C   +P  T   VG V  +L  R+  +      C+Q G I P P+L R
Sbjct: 252 CTNSFPLGTLLCVGIVICNLSVRKVLYQSHRKMCRQFGSIKPTPMLNR 299


>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +1

Query: 226 VYVWFMNESARWLLSKGRRDEAIDVLKRAAKINNL 330
           V VWF N  A+W   K    E     +  +KI  L
Sbjct: 231 VEVWFKNRRAKWRKQKREEQEQFSNYEINSKIRKL 265


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 16/53 (30%), Positives = 18/53 (33%)
 Frame = +3

Query: 231  RLVYERKRALASQQRTKGRSN*RTETRRQDQQSRPEESGSRCARRSPAETAEP 389
            R    R+ A   QQ  +     RTE RRQ           R  R  P   A P
Sbjct: 1085 RAASNREEAEIQQQLQREEDERRTEERRQLHNEANRAYRQRNRRSQPTPPAPP 1137


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 183 PPVVYSPGQKGYENDADNEG 124
           P V+  PGQKG    A N+G
Sbjct: 196 PGVIGLPGQKGDMGQAGNDG 215


>CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase
           protein.
          Length = 573

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 472 WMTCSLVYYGFSINSVSLSSNRYVSFMLVTLVEIPAYIGGSHRA 603
           W+  ++  +G   NSV++  N   + ++  LV   A  G  HRA
Sbjct: 197 WVRSNIAAFGGDPNSVTIFGNSAGAALVHLLVLTDAGAGLFHRA 240


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,087
Number of Sequences: 2352
Number of extensions: 14173
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)