Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0646
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.0  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   9.2  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   9.2  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   9.2  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    23   9.2  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 18/67 (26%), Positives = 30/67 (44%)
 Frame = -1

Query: 591 ALGSG*GVIPEFPQHSSNEYSPPSSGMFSNFLAPGLGPLTADSALCSVSLIGFPATHCVI 412
           ++G G   +P+ P  SS   S PS+GM      PG   L   S   S++      +H + 
Sbjct: 590 SMGLGLPQVPQPPAGSSLNLSHPSAGMVPQPPPPG-SALGHPSIPTSLAAAAAAYSHSIA 648

Query: 411 TDTNNRH 391
           +  ++ H
Sbjct: 649 STMSSYH 655


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +2

Query: 461 ALSAVRGPSPGAKKLLNIPEDGGEYSLLECCGNSGITP 574
           A S   GP  G   L  +P  GG+  L    GN  ++P
Sbjct: 413 AASGGVGPCFGEPPLPALPLPGGDDDLFSPTGNGDMSP 450


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 16/54 (29%), Positives = 22/54 (40%)
 Frame = -1

Query: 552 QHSSNEYSPPSSGMFSNFLAPGLGPLTADSALCSVSLIGFPATHCVITDTNNRH 391
           +HS  +    S     +   PG GPL A SA         PA H   + T ++H
Sbjct: 469 RHSEKQQQQQSQHQQQHQHQPGGGPLPAQSAKQRTK--SKPAEHAGGSTTGDKH 520


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 16/54 (29%), Positives = 22/54 (40%)
 Frame = -1

Query: 552 QHSSNEYSPPSSGMFSNFLAPGLGPLTADSALCSVSLIGFPATHCVITDTNNRH 391
           +HS  +    S     +   PG GPL A SA         PA H   + T ++H
Sbjct: 469 RHSEKQQQQQSQHQQQHQHQPGGGPLPAQSAKQRTK--SKPAEHAGGSTTGDKH 520


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 638 GSINSPALKT*VLVYKRWVLDKE*F 564
           G  N P + T V  Y RW+++   F
Sbjct: 411 GEANHPGIYTRVSSYVRWIIENAVF 435


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 769,038
Number of Sequences: 2352
Number of extensions: 16461
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)