Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0645
         (627 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...   218   4e-59
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...   217   1e-58
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...   150   1e-38
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    24   1.1  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    24   1.1  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    24   1.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.8  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    22   5.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   9.8  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   9.8  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   9.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.8  

>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score =  218 bits (532), Expect = 4e-59
 Identities = 101/111 (90%), Positives = 105/111 (94%)
 Frame = -3

Query: 622 PPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPK 443
           PPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFA+IKEK DRR GK+TE NPK
Sbjct: 333 PPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENPK 392

Query: 442 SIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNF 290
           SIKSGDAAIV LVPSKP+C E+FQEFPPLGRFAVRDMRQTVAVGVIKAV F
Sbjct: 393 SIKSGDAAIVMLVPSKPMCAEAFQEFPPLGRFAVRDMRQTVAVGVIKAVTF 443


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score =  217 bits (529), Expect = 1e-58
 Identities = 100/111 (90%), Positives = 106/111 (95%)
 Frame = -3

Query: 622 PPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPK 443
           PP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE NPK
Sbjct: 333 PPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPK 392

Query: 442 SIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNF 290
           SIKSGDAAIV L P+KP+CVE+FQEFPPLGRFAVRDMRQTVAVGVIK+V F
Sbjct: 393 SIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDMRQTVAVGVIKSVTF 443


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score =  150 bits (363), Expect = 1e-38
 Identities = 69/76 (90%), Positives = 72/76 (94%)
 Frame = -3

Query: 622 PPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPK 443
           PP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE NPK
Sbjct: 44  PPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPK 103

Query: 442 SIKSGDAAIVNLVPSK 395
           SIKSGDAAIV L P+K
Sbjct: 104 SIKSGDAAIVMLQPTK 119


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 183 KYRSCMKNCAVNSSSYFLPLVAFS 254
           K+  C+KN A   SSYF+  + F+
Sbjct: 94  KFYDCLKNSADTISSYFVGKMYFN 117


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 183 KYRSCMKNCAVNSSSYFLPLVAFS 254
           K+  C+KN A   SSYF+  + F+
Sbjct: 99  KFYDCLKNSADTISSYFVGKMYFN 122


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 183 KYRSCMKNCAVNSSSYFLPLVAFS 254
           K+  C+KN A   SSYF+  + F+
Sbjct: 99  KFYDCLKNSADTISSYFVGKMYFN 122


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 144 CSPFFLRNTFR*MKYRSCMKN 206
           C  FF R+  + ++YR C KN
Sbjct: 87  CKGFFRRSIQQKIQYRPCTKN 107


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 554 RLHTSLGLPHCPHC 513
           RLHT     HC HC
Sbjct: 30  RLHTGEKPYHCSHC 43


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 627 QPHLRVLQILQLKSLCLTILVKSQTVTHQSWIATL 523
           QPHLR L  L+       + ++SQ      ++ATL
Sbjct: 312 QPHLRGLNGLEFAGRPQNLQLQSQRNQLIQYVATL 346


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 451 NPKSIKSGDAAIVNLVPSKPLC 386
           NP+    G   +V L PS P C
Sbjct: 66  NPEHKPPGPKDLVYLEPSPPFC 87


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 451 NPKSIKSGDAAIVNLVPSKPLC 386
           NP+    G   +V L PS P C
Sbjct: 67  NPEHKPPGPKDLVYLEPSPPFC 88


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 429 EMQPLSTWYLPSL 391
           +  P+  WY+PSL
Sbjct: 589 DKNPVQLWYVPSL 601


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,579
Number of Sequences: 438
Number of extensions: 3317
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)