Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0644
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    24   1.0  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    24   1.0  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   3.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   3.2  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   3.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   3.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.8  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
 Frame = +2

Query: 164 RGRQRIAQ----RLKDAQNTNAMLTTFNEIDMSHIMAFRKKHLDTFTKKHSIKL 313
           RGRQ   +     L+   +TN  LT    I+M+H +   ++ +  + +   +KL
Sbjct: 225 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKL 278


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
 Frame = +2

Query: 164 RGRQRIAQ----RLKDAQNTNAMLTTFNEIDMSHIMAFRKKHLDTFTKKHSIKL 313
           RGRQ   +     L+   +TN  LT    I+M+H +   ++ +  + +   +KL
Sbjct: 7   RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKL 60


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 190 TLSDALPPPVHLDPLLGARAGDLFAVVLWRNFN 92
           T  ++LP    +D     + G+ FA +L  NFN
Sbjct: 370 TFDESLPGCHMVDSCSNIQTGEQFARLLRHNFN 402


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 190 TLSDALPPPVHLDPLLGARAGDLFAVVLWRNFN 92
           T  ++LP    +D     + G+ FA +L  NFN
Sbjct: 377 TFDESLPGCHMVDSCSNIQTGEQFARLLRHNFN 409


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 331 ER*HQTEFDAVLLSEGVEVL 272
           +R  Q +FD  LL EGV+++
Sbjct: 202 QRLDQIQFDICLLKEGVDLV 221


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 331 ER*HQTEFDAVLLSEGVEVL 272
           +R  Q +FD  LL EGV+++
Sbjct: 202 QRLDQIQFDICLLKEGVDLV 221


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 467 IRNVQNMTYADI 502
           +RNVQ  T+AD+
Sbjct: 104 VRNVQQHTFADL 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,889
Number of Sequences: 336
Number of extensions: 2269
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)