Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0644
(571 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29025| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 3e-27
SB_31440| Best HMM Match : 2-oxoacid_dh (HMM E-Value=3.5e-14) 73 2e-13
SB_42465| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0) 61 7e-10
SB_10000| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0) 55 4e-08
SB_16687| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_42560| Best HMM Match : ig (HMM E-Value=2.4e-06) 32 0.38
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 31 0.66
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11) 31 0.88
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 31 0.88
SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1) 30 1.2
SB_19407| Best HMM Match : SURF6 (HMM E-Value=0.43) 30 1.2
SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34) 30 1.5
SB_51402| Best HMM Match : Peptidase_M13_N (HMM E-Value=1.9e-12) 29 2.0
SB_29969| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_36761| Best HMM Match : DUF1279 (HMM E-Value=0.23) 29 2.7
SB_7376| Best HMM Match : ELO (HMM E-Value=3.3e-07) 29 3.5
SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_47024| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_43387| Best HMM Match : DUF1103 (HMM E-Value=1.5e-07) 28 4.7
SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6) 28 4.7
SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 28 6.2
SB_24457| Best HMM Match : TPR_2 (HMM E-Value=1.4e-16) 28 6.2
SB_20853| Best HMM Match : F-box (HMM E-Value=1.1e-05) 27 8.2
SB_11721| Best HMM Match : Peptidase_C12 (HMM E-Value=0) 27 8.2
SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07) 27 8.2
>SB_29025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 118 bits (284), Expect = 3e-27
Identities = 70/139 (50%), Positives = 85/139 (61%), Gaps = 3/139 (2%)
Frame = +2
Query: 125 IAGTRTEQRVKMNRGRQRIAQRLKDAQNTNAMLTTFNEIDMSHIMAFRKKHLDTFTKKHS 304
+ G R+E RVKMNR R RIA RLKD+QNT AMLTTFN+IDMS+IM R+ + D F KKH
Sbjct: 198 LQGARSEHRVKMNRMRLRIASRLKDSQNTYAMLTTFNDIDMSNIMEMRQTYKDAFFKKHG 257
Query: 305 IKLGLMSPFVKAAANALMDQPVVNAVIE-ENEIIYRDYVDISVAVATPKGLVVPVIRNVQ 481
+KLG MS FVKAAA AL PVVNA E + +II V +A G+VV V+
Sbjct: 258 LKLGFMSAFVKAAAYALESLPVVNAACETQIKIIITKGQSALVLLAVCTGVVVDRTFQVE 317
Query: 482 --NMTYADIRAHHSWASGK 532
M Y + H G+
Sbjct: 318 IRPMMYVALTYDHRLIDGR 336
>SB_31440| Best HMM Match : 2-oxoacid_dh (HMM E-Value=3.5e-14)
Length = 107
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/53 (62%), Positives = 43/53 (81%)
Frame = +2
Query: 383 IEENEIIYRDYVDISVAVATPKGLVVPVIRNVQNMTYADIRAHHSWASGKSEN 541
IE+N+I+YRDYVDISVAV+TPKGLVVPV+RNV++M +ADI + K+ N
Sbjct: 2 IEDNQIVYRDYVDISVAVSTPKGLVVPVLRNVESMNFADIEKAINALGEKARN 54
>SB_42465| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0)
Length = 441
Score = 60.9 bits (141), Expect = 7e-10
Identities = 39/116 (33%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
Frame = +2
Query: 143 EQRVKMNRG-RQRIAQRLKDAQNTNAMLTTFNEIDMSHIMAFRKKHLDTFTKKHSIKLGL 319
E RV+ +G R+ +A+ + A N +EI ++ ++ F KKH++ ++ +KL
Sbjct: 209 EDRVENIKGIRKAMAKTMTAALNI-PHFGYCDEILLNELVDF-KKHINPMLEQRGVKLSF 266
Query: 320 MSPFVKAAANALMDQPVVNAVI--EENEIIYRDYVDISVAVATPKGLVVPVIRNVQ 481
M F+KAA+ AL P++N+ + E +I ++ +I +A+ TP+GLVVP ++NVQ
Sbjct: 267 MPLFIKAASMALQQFPILNSSVDPECTKITFKAAHNIGLAMDTPQGLVVPNVKNVQ 322
>SB_10000| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0)
Length = 382
Score = 55.2 bits (127), Expect = 4e-08
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Frame = +2
Query: 68 AQAIETATVKVPPQDYSKEIAGTRTEQRVKMNRGRQRIAQRLKDAQNTNAMLTTFNEIDM 247
A + ++ K PQ + T V R+ IA+RL ++ T + + M
Sbjct: 138 APPVVSSARKAVPQPVTPATPSPGTFTDVPNTEMRREIAKRLLKSKTTIPHVYASTDCVM 197
Query: 248 SHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALMDQPVVNAVIEENEIIYRDYVDIS 427
+++ K HL K+ + + + VK AA L P +NAV EI Y +D++
Sbjct: 198 DNLLQL-KSHL----KERGVTVSVNDLLVKVAAVCLRKVPEMNAVWNGKEIEYLKDIDLA 252
Query: 428 VAVATPKGLVVPVIRNVQNMTYADIR-AHHSWASGKSENR 544
V VAT G++ PVIRN + + I H A+ +N+
Sbjct: 253 VDVATDVGIITPVIRNAAYLDLSQISLVAHDIATRARDNK 292
>SB_16687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 46.0 bits (104), Expect = 2e-05
Identities = 38/132 (28%), Positives = 61/132 (46%)
Frame = +2
Query: 74 AIETATVKVPPQDYSKEIAGTRTEQRVKMNRGRQRIAQRLKDAQNTNAMLTTFNEIDMSH 253
A A P + I GT E + ++ RQ IA+RL ++ T ++ M
Sbjct: 182 AASAALAAQPTPVAAAPIPGTVYED-IPLSNMRQVIAKRLLQSKQTIPHYYLSVDVKMDQ 240
Query: 254 IMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALMDQPVVNAVIEENEIIYRDYVDISVA 433
++ RK+ + K S KL + VK+ A A P N+ + I + VD+SVA
Sbjct: 241 LIEIRKQLNEQ--GKGSYKLSINDFIVKSCALACRQVPEANSSWMGDFIRRYENVDVSVA 298
Query: 434 VATPKGLVVPVI 469
V+T GL+ P++
Sbjct: 299 VSTDNGLITPIV 310
>SB_42560| Best HMM Match : ig (HMM E-Value=2.4e-06)
Length = 360
Score = 31.9 bits (69), Expect = 0.38
Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 4/131 (3%)
Frame = +1
Query: 109 GLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHERHVDDIQRDRHVPHHGIP*EAPRHL 288
G +D+ ++ G+ QGE + EH +H + H H G P + +
Sbjct: 223 GKPNQDQGQHNKHCGKPNQGEHNKHCGKPNQGEHNKHCGKPNQGEHNKHCGKPNQGEHNK 282
Query: 289 H*EAQHQTRSDVTF---REGGRQRPDG-PARGERCYRRKRDNL*GLRRYFGSGRHTERSR 456
H +Q + +G + G P +GE + N ++ G E ++
Sbjct: 283 HCGKPNQGEHNKHCGKPNQGEHNKHCGKPNQGEHNKHCGKPNQGQHNKHCGKPNQGEHNK 342
Query: 457 RAGHQKRSEHD 489
G + EH+
Sbjct: 343 HCGKPNQGEHN 353
Score = 28.7 bits (61), Expect = 3.5
Identities = 23/113 (20%), Positives = 41/113 (36%)
Frame = +1
Query: 151 GQDEQGEATHRSAFEGRSEHERHVDDIQRDRHVPHHGIP*EAPRHLH*EAQHQTRSDVTF 330
G+ QGE + EH +H + H H G P + + H +Q +
Sbjct: 175 GKPNQGEHNKHCGKPNQGEHNKHCGKPNQGEHNKHCGKPNQGEHNKHCGKPNQDQGQHN- 233
Query: 331 REGGRQRPDGPARGERCYRRKRDNL*GLRRYFGSGRHTERSRRAGHQKRSEHD 489
+ G+ P +GE + N ++ G E ++ G + EH+
Sbjct: 234 KHCGK-----PNQGEHNKHCGKPNQGEHNKHCGKPNQGEHNKHCGKPNQGEHN 281
Score = 28.3 bits (60), Expect = 4.7
Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 1/127 (0%)
Frame = +1
Query: 112 LQQRDRRH-AHRATGQDEQGEATHRSAFEGRSEHERHVDDIQRDRHVPHHGIP*EAPRHL 288
L++ R H H + QGE + EH +H + H H G P + +
Sbjct: 149 LRRVTRTHNKHCGKPRPNQGEHNKHCGKPNQGEHNKHCGKPNQGEHNKHCGKPNQGEHNK 208
Query: 289 H*EAQHQTRSDVTFREGGRQRPDGPARGERCYRRKRDNL*GLRRYFGSGRHTERSRRAGH 468
H +Q + + G+ D + C + N ++ G E ++ G
Sbjct: 209 HCGKPNQGEHN---KHCGKPNQDQGQHNKHC---GKPNQGEHNKHCGKPNQGEHNKHCGK 262
Query: 469 QKRSEHD 489
+ EH+
Sbjct: 263 PNQGEHN 269
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 31.1 bits (67), Expect = 0.66
Identities = 19/75 (25%), Positives = 30/75 (40%)
Frame = +1
Query: 34 HLLNTSRRHPSRSGDRDSNC*SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHE 213
H ++ RH R S+ + + + Q + H G+ G +S R++H
Sbjct: 289 HAKKSTGRHQKSVYQRKSDAKNRNISVNQIKTANKHETFGRQRHG--LRQSKKHHRNKHY 346
Query: 214 RHVDDIQRDRHVPHH 258
RH D RH HH
Sbjct: 347 RHHDRNHHHRHHHHH 361
>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
Length = 3037
Score = 30.7 bits (66), Expect = 0.88
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = +2
Query: 149 RVKMNRGRQRIAQRLKDAQNTNAMLTTF--NEIDMSHIMAFRKKHLD---TFTKKHSIKL 313
+VKM++ +++ K +A TF N DM+ + R++HL+ T K S
Sbjct: 1462 QVKMHKTKEQQCNVEKTLPEESAQKRTFVKNRTDMASSLNIRRRHLEDSKTLEKSKSFSS 1521
Query: 314 GLMSPFVKAAAN 349
GL P V AA+
Sbjct: 1522 GLDVPVVDNAAD 1533
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 30.7 bits (66), Expect = 0.88
Identities = 32/120 (26%), Positives = 44/120 (36%)
Frame = +1
Query: 130 RHAHRATGQDEQGEATHRSAFEGRSEHERHVDDIQRDRHVPHHGIP*EAPRHLH*EAQHQ 309
RH + + H S S HER + R PH E RH E
Sbjct: 8 RHKTKQHETSRHERSRHESNRHKTSRHERSRHETSRHESSPHETSRHETSRH---ETSRH 64
Query: 310 TRSDVTFREGGRQRPDGPARGERCYRRKRDNL*GLRRYFGSGRHTERSRRAGHQKRSEHD 489
RS R+ R R +R E R + + G R+ S T R R+ H+ R +H+
Sbjct: 65 ERSRHETRQHERSR-HKTSRHES--SRHKTSRHGRSRHKTSRHETSRHERSRHETR-QHE 120
Score = 29.1 bits (62), Expect = 2.7
Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 4/132 (3%)
Frame = +1
Query: 106 TGLQQRDRRHAHR-ATGQDEQGE---ATHRSAFEGRSEHERHVDDIQRDRHVPHHGIP*E 273
T +R R ++R T + E+ + H S+ S HE + R H E
Sbjct: 16 TSRHERSRHESNRHKTSRHERSRHETSRHESSPHETSRHETSRHETSRHERSRHETRQHE 75
Query: 274 APRHLH*EAQHQTRSDVTFREGGRQRPDGPARGERCYRRKRDNL*GLRRYFGSGRHTERS 453
RH ++H++ T R G + R R + + R + RH +
Sbjct: 76 RSRHK--TSRHESSRHKTSRHGRSRHKTSRHETSRHERSRHETRQHERSRHKTSRHEKSR 133
Query: 454 RRAGHQKRSEHD 489
+RS H+
Sbjct: 134 HETSRHERSRHE 145
Score = 28.7 bits (61), Expect = 3.5
Identities = 24/94 (25%), Positives = 34/94 (36%)
Frame = +1
Query: 46 TSRRHPSRSGDRDSNC*SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHERHVD 225
TSR SR R T + RH G+ + H ++ RS HE
Sbjct: 61 TSRHERSRHETRQHERSRHKTS-RHESSRHKTSRHGRSRHKTSRHETSRHERSRHETRQH 119
Query: 226 DIQRDRHVPHHGIP*EAPRHLH*EAQHQTRSDVT 327
+ R + H E RH ++H+TR T
Sbjct: 120 ERSRHKTSRHEKSRHETSRHE--RSRHETRQHET 151
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 30.7 bits (66), Expect = 0.88
Identities = 32/121 (26%), Positives = 46/121 (38%)
Frame = +1
Query: 127 RRHAHRATGQDEQGEATHRSAFEGRSEHERHVDDIQRDRHVPHHGIP*EAPRHLH*EAQH 306
RRH + Q + S F R E + D Q P H ++PR H
Sbjct: 401 RRHLREEERRLSQTQENRDSKF--RPESDDPSDKNQHRERSPGHRRRSQSPRRRSRSPGH 458
Query: 307 QTRSDVTFREGGRQRPDGPARGERCYRRKRDNL*GLRRYFGSGRHTERSRRAGHQKRSEH 486
++RS R+ R R G R +R R RD GR +R + GH++ +
Sbjct: 459 RSRSPRRGRD--RDRDRGRDRRDRDRDRDRDR--------DRGRDRDRDKDKGHERPKDR 508
Query: 487 D 489
D
Sbjct: 509 D 509
>SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1)
Length = 432
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 67 RSGDRDSNC*SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHERHVDDIQRDR 243
RSGDR+ + ++R RRH +G D + E + A + R DD ++ R
Sbjct: 157 RSGDREKSDREKEREKERRRRRHEDEGSG-DRRRERRDKDAHDPEDPKRREKDDKKKSR 214
>SB_19407| Best HMM Match : SURF6 (HMM E-Value=0.43)
Length = 443
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 107 QDYSKEIAGTRTEQRVKMNRGRQRIAQRLKDAQNT 211
Q +K IAG R QR++ RGR+R QR+++ Q T
Sbjct: 310 QRLNKRIAGVR--QRLESLRGRKRKLQRMREEQET 342
>SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34)
Length = 750
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +1
Query: 16 GTRRCSHLLNTSRRHPSRSGDRDSNC*SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFE 195
G S + T H R G+ + S+ R H ++ DE+ + H S F
Sbjct: 402 GHSESSQSVKTIGDHSRRYGNENDYTDSAGDRKASRFGAHNEASSTFDEKNKEDHSSRFH 461
Query: 196 GRSEHE 213
G+ +HE
Sbjct: 462 GKKDHE 467
>SB_51402| Best HMM Match : Peptidase_M13_N (HMM E-Value=1.9e-12)
Length = 1206
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +1
Query: 97 SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEH--ERHVDDIQRDRHVPHHG 261
S +TG+ R H TGQD Q E TH S E R + + RD V HG
Sbjct: 880 SENTGIDARFGFHGSERTGQDAQFE-THGSGREVRDARICTHEMGRMARDAQVGTHG 935
>SB_29969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 40 LNTSRRHPSRSGDRDSNC*SSSTGLQQRDRRHAHRATGQDE 162
+N +R H GDR + G+++R+R H H T QDE
Sbjct: 166 INAARYHRC-VGDRGDGGIYETPGIRRRERFHGHDVTTQDE 205
>SB_36761| Best HMM Match : DUF1279 (HMM E-Value=0.23)
Length = 244
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 97 SSSTGLQQRDRRHAH-RATGQDEQGEATHRSAFEGRSEHERHVDDIQRD 240
++S+ +Q+RDR+ A R Q + E++ + A E E +D+++R+
Sbjct: 6 TTSSVMQERDRKAAEKRVQRQKDTQESSRQEARERNEERLSEIDELERE 54
>SB_7376| Best HMM Match : ELO (HMM E-Value=3.3e-07)
Length = 278
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 306 MLCFLVKVSRCFLRNAMMWDMSISLNVVNMAFVF*ASF 193
M F+VKV F+ N WD+ L V N A V +++
Sbjct: 40 MYLFIVKVGPKFMENRKAWDLRGVLVVYNFALVLLSAY 77
>SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 28.7 bits (61), Expect = 3.5
Identities = 26/119 (21%), Positives = 41/119 (34%)
Frame = +1
Query: 133 HAHRATGQDEQGEATHRSAFEGRSEHERHVDDIQRDRHVPHHGIP*EAPRHLH*EAQHQT 312
H + ++G S R E H+D R R E P HL + +
Sbjct: 38 HLETTMRRRKEGPIHLDSTMRRRREGPIHLDTTMRRRR--------EGPIHLDSTMRRRR 89
Query: 313 RSDVTFREGGRQRPDGPARGERCYRRKRDNL*GLRRYFGSGRHTERSRRAGHQKRSEHD 489
+ R+R +GP + RR+R+ + G+H E R H H+
Sbjct: 90 EGPIHLDSTMRRRREGPIHLDSTMRRRREGV------HPPGQHHEEEERGAHPPGQHHE 142
>SB_47024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = +1
Query: 115 QQRDRRHAHRATGQDEQGEATHRSAF-----EGRSEHERHVDDIQRDRHVPHHGIP*EAP 279
++R+R R + E+ + H A E R ER + ++QR H + E
Sbjct: 722 EKREREIREREEREWEENKRKHEEARLQREREAREREERELRELQRREEEEHESLAREEG 781
Query: 280 RHLH*EAQHQTRSDVTFREGGRQRPD 357
E+Q + DV +E + PD
Sbjct: 782 ERAERESQREAGRDV--KEEDSKEPD 805
>SB_43387| Best HMM Match : DUF1103 (HMM E-Value=1.5e-07)
Length = 644
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/51 (25%), Positives = 20/51 (39%)
Frame = +1
Query: 139 HRATGQDEQGEATHRSAFEGRSEHERHVDDIQRDRHVPHHGIP*EAPRHLH 291
+ AT D + TH + + H D +D H+ H P H+H
Sbjct: 12 YTATDPDNKDHHTHNKGPDNKDHHTHSKDPDNKDHHI-HSKDPDNKDHHIH 61
>SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6)
Length = 192
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/77 (22%), Positives = 26/77 (33%)
Frame = +1
Query: 55 RHPSRSGDRDSNC*SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHERHVDDIQ 234
RH + D + + DR R ++E R+ E H+ +D +
Sbjct: 110 RHDEERNNEDEDRHDEERNNEHEDRHDKGRNDDEEEDRHDGERNDDEEEDRHDEERNDDE 169
Query: 235 RDRHVPHHGIP*EAPRH 285
DRH E RH
Sbjct: 170 EDRHDEKRNEDEEEDRH 186
Score = 27.5 bits (58), Expect = 8.2
Identities = 23/107 (21%), Positives = 32/107 (29%)
Frame = +1
Query: 55 RHPSRSGDRDSNC*SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHERHVDDIQ 234
RH D D + + D RH +DE G R+ E H+ ++
Sbjct: 26 RHDEERNDEDEDRHDEERNNEHED-RHDEERNDEDEDGHDEERNN-EHEDRHDEERNNEH 83
Query: 235 RDRHVPHHGIP*EAPRHLH*EAQHQTRSDVTFREGGRQRPDGPARGE 375
DRH E +H+ R D R D E
Sbjct: 84 EDRHDEERNNEEEDKHDEERNNEHEDRHDEERNNEDEDRHDEERNNE 130
>SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 121 RDRRHAHRATGQDEQGEATHRSAFEGRSEHERHVDDIQR--DRH 246
R+R R+ +D++ +++ RS E H H D +R DRH
Sbjct: 308 RERERRDRSIPRDDRLDSSRRSRHEDERSHSSHQDRHERESDRH 351
Score = 28.3 bits (60), Expect = 4.7
Identities = 36/142 (25%), Positives = 51/142 (35%)
Frame = +1
Query: 61 PSRSGDRDSNC*SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHERHVDDIQRD 240
P R DR S+ ++RDR R +D + HR + E D +RD
Sbjct: 747 PDREDDRASDISRDREEREKRDREDRDRRDREDRE----HREREDRERERRDREDRERRD 802
Query: 241 RHVPHHGIP*EAPRHLH*EAQHQTRSDVTFREGGRQRPDGPARGERCYRRKRDNL*GLRR 420
R + R + + + R D RE R+ + R E+ KRD RR
Sbjct: 803 RDERDRRDREDRERRDREDRERRDRED---RERERREREDRERREKEEFDKRDR---ERR 856
Query: 421 YFGSGRHTERSRRAGHQKRSEH 486
R E R +R EH
Sbjct: 857 EKDDRRPREDDRERVRGRREEH 878
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 27.9 bits (59), Expect = 6.2
Identities = 27/103 (26%), Positives = 36/103 (34%)
Frame = +1
Query: 178 HRSAFEGRSEHERHVDDIQRDRHVPHHGIP*EAPRHLH*EAQHQTRSDVTFREGGRQRPD 357
HR +EG HE DD + ++ E R E +H R EG
Sbjct: 488 HRDNYEGGPGHEYESDDFDQQLKEYNYRRQREREREREREGRHMDRGPRDRHEGDYTEVT 547
Query: 358 GPARGERCYRRKRDNL*GLRRYFGSGRHTERSRRAGHQKRSEH 486
G G R + RD G R G + + H K S+H
Sbjct: 548 G---GSRWSQGDRDRDRGPDRESSVGSYDDEREPRDH-KPSQH 586
>SB_24457| Best HMM Match : TPR_2 (HMM E-Value=1.4e-16)
Length = 1134
Score = 27.9 bits (59), Expect = 6.2
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +2
Query: 116 SKEIAGTRTEQRVKMNRGRQRIAQRLKDAQNTNAMLTTFNEIDMSHIMAFRKKHLDTFTK 295
++ ++ T E ++ R R K + T ++ID I+ + L+T+++
Sbjct: 2 ARRVSRTALENEIERARVEGRWESLSKLVEQLCTRTTQESQIDSLKILLLAEADLETYSR 61
Query: 296 KHSIKLGLMSPFVKAAANALMDQPVV---NAVIEENE 397
HS+ + ++AA +AL +PVV N VI+E +
Sbjct: 62 DHSLDVN----DLRAARSAL--EPVVTKLNNVIQERK 92
>SB_20853| Best HMM Match : F-box (HMM E-Value=1.1e-05)
Length = 637
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 86 LSRSPERDGWRRLVLRRWEQR 24
+S++P WRRLVLRRW+ +
Sbjct: 34 ISKTPSL--WRRLVLRRWQSQ 52
>SB_11721| Best HMM Match : Peptidase_C12 (HMM E-Value=0)
Length = 537
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 231 STRSTCPTSWHSVRSTSTPSLRSTA 305
+T ST S+ SV +TSTPSL S A
Sbjct: 296 TTCSTVSLSFSSVTATSTPSLESVA 320
>SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07)
Length = 423
Score = 27.5 bits (58), Expect = 8.2
Identities = 7/20 (35%), Positives = 17/20 (85%)
Frame = +1
Query: 199 RSEHERHVDDIQRDRHVPHH 258
R ++++H ++I++++H PHH
Sbjct: 164 RVQYKKHKEEIEKNQHRPHH 183
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,417,045
Number of Sequences: 59808
Number of extensions: 353937
Number of successful extensions: 1260
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1349364063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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