Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0644
(571 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical ... 185 2e-47
Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical pr... 57 8e-09
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 32 0.25
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 32 0.25
Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 32 0.33
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 31 0.58
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 31 0.58
Z82073-5|CAB63322.1| 333|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z74030-12|CAA98434.1| 320|Caenorhabditis elegans Hypothetical p... 30 1.0
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 30 1.3
U21317-4|AAA62523.1| 719|Caenorhabditis elegans Hypothetical pr... 29 2.4
U64844-2|AAO25987.1| 846|Caenorhabditis elegans Hypothetical pr... 28 5.4
U64844-1|AAK72092.1| 882|Caenorhabditis elegans Hypothetical pr... 28 5.4
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 28 5.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical ... 28 5.4
Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical pr... 27 7.2
>AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical
protein W02F12.5 protein.
Length = 463
Score = 185 bits (451), Expect = 2e-47
Identities = 94/144 (65%), Positives = 109/144 (75%), Gaps = 1/144 (0%)
Frame = +2
Query: 74 AIETATVKVPPQ-DYSKEIAGTRTEQRVKMNRGRQRIAQRLKDAQNTNAMLTTFNEIDMS 250
A+ V VP D S I G R E RVK NR R RIAQRLKDAQNT AMLTTFNEIDMS
Sbjct: 210 AVPVTRVVVPKGVDPSHAITGARDEVRVKANRMRMRIAQRLKDAQNTYAMLTTFNEIDMS 269
Query: 251 HIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALMDQPVVNAVIEENEIIYRDYVDISV 430
++ RK + F KH +KLG+MSPFV+AAA AL + PVVNAV++ENEI+YR +VDISV
Sbjct: 270 SLIEMRKTYQKDFVAKHGVKLGMMSPFVRAAAYALQESPVVNAVLDENEIVYRHFVDISV 329
Query: 431 AVATPKGLVVPVIRNVQNMTYADI 502
AVATPKGLVVPV+RNV++M YA I
Sbjct: 330 AVATPKGLVVPVLRNVESMNYAQI 353
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 504 ELTIAGLAEKARTGKLTIEKMD 569
EL +A L KAR GKL +E M+
Sbjct: 354 ELELANLGVKARDGKLAVEDME 375
>Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical
protein ZK669.4 protein.
Length = 448
Score = 57.2 bits (132), Expect = 8e-09
Identities = 32/92 (34%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = +2
Query: 233 NEIDMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALMDQPVVNAVIEE--NEIIY 406
+EI++ ++ +R + L F K+ IKL M F+KAA+ AL++ P +N+ +E +I+
Sbjct: 246 DEINVDSLVKYRAE-LKEFAKERHIKLSYMPFFIKAASLALLEYPSLNSTTDEKMENVIH 304
Query: 407 RDYVDISVAVATPKGLVVPVIRNVQNMTYADI 502
+ +I +A+ TP GLVVP I+N + + +I
Sbjct: 305 KASHNICLAMDTPGGLVVPNIKNCEQRSIFEI 336
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 53.2 bits (122), Expect = 1e-07
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Frame = +2
Query: 152 VKMNRGRQRIAQRLKDAQNTNAMLTTFNEIDMSHIMAFRKKH---LDTFTKKHSIKLGLM 322
+ ++ R+ IA+RL ++++T +EI + ++ R+K L T + K+ +
Sbjct: 278 IPLSNMRKTIAKRLTESKSTIPHYYLTSEIQLDTLLQVREKLNGLLAKGTSGQATKISIN 337
Query: 323 SPFVKAAANALMDQPVVNAVIEENEIIYRDYVDISVAVATPKGLVVPVIRNVQNMTYADI 502
+KA+A A P N+ ++ I +VD+SVAV+TP GL+ P+I N A I
Sbjct: 338 DFIIKASALACQRVPEANSYWMDSFIRENHHVDVSVAVSTPAGLITPIIFNAHAKGLATI 397
>Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical
protein C30H6.7 protein.
Length = 337
Score = 51.6 bits (118), Expect = 4e-07
Identities = 42/133 (31%), Positives = 62/133 (46%)
Frame = +2
Query: 77 IETATVKVPPQDYSKEIAGTRTEQRVKMNRGRQRIAQRLKDAQNTNAMLTTFNEIDMSHI 256
IE +++ + R Q + ++ R IA+RL ++ ++ + I
Sbjct: 78 IENKSIEKKSDIFGANNRSLRHHQDIPLSNIRATIAKRLTASKQQIPHEYQGVDVRIDDI 137
Query: 257 MAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALMDQPVVNAVIEENEIIYRDYVDISVAV 436
+A R+K KK + L +KAAA AL P VN V E I VDISVAV
Sbjct: 138 LALRQK-----LKKSGTAVSLNDFIIKAAALALRSVPTVN-VRWTPEGIGLGSVDISVAV 191
Query: 437 ATPKGLVVPVIRN 475
ATP GL+ P++ N
Sbjct: 192 ATPTGLITPIVEN 204
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 32.3 bits (70), Expect = 0.25
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +1
Query: 64 SRSGDRDSNC*SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEG-RSEHERHVDD--IQ 234
S S S+ SSS+ + +++HA E + H EG EH H D+ +
Sbjct: 343 SSSSSSSSSSSSSSSSESEDEKKHAPAHHEHHEHKDGAHHEHKEGEHHEHAAHHDEHGVH 402
Query: 235 RDRHVPHHGIP*EAPRH 285
H HHG +P H
Sbjct: 403 HRHHGEHHGTH-HSPAH 418
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/66 (28%), Positives = 20/66 (30%)
Frame = +1
Query: 109 GLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHERHVDDIQRDRHVPHHGIP*EAPRHL 288
G H T GE H A G HE H H HHG AP H
Sbjct: 411 GTHHSPAHHGEHGTHHGHHGEHHHAPAHHGH--HESHGHGHHSPAHHGHHGEHHHAPAHH 468
Query: 289 H*EAQH 306
+H
Sbjct: 469 GHHGEH 474
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/57 (28%), Positives = 20/57 (35%)
Frame = +1
Query: 115 QQRDRRHAHRATGQDEQGEATHRSAFEGRSEHERHVDDIQRDRHVPHHGIP*EAPRH 285
+ ++ H A DE G HR E H + H HHG AP H
Sbjct: 383 EHKEGEHHEHAAHHDEHG-VHHRHHGEHHGTHHSPAHHGEHGTHHGHHGEHHHAPAH 438
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = +2
Query: 62 RHAQAIETATVKVPPQDYSKEIAGTRTEQRVKMNRGRQRIAQRLKDAQNTNAMLTTFNEI 241
RH A + VPP+ + G+ TEQR + +R + + +D ++ + +
Sbjct: 104 RHTNQTVVAGIPVPPEKPERSGEGSSTEQRDRDHRQHRPTSHHHRDHKDHHRRDDKHHHR 163
Query: 242 DMSHIMAFRKKH 277
D +H A +++H
Sbjct: 164 DSNHRHAHKRRH 175
>Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical
protein W06F12.2c protein.
Length = 502
Score = 31.9 bits (69), Expect = 0.33
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 19 TRRCSHLLNTSRRHPSRSGDRDSNC*SSSTGLQQRDRRHA--HRATGQDEQGEATHRSAF 192
+R H N+ RR SRS DS S + ++R+RR + +R G HR
Sbjct: 365 SRHQRHRSNSKRRQRSRSRYDDSVYDSEADRERERERRRSKRNRQGGSQRSSSKKHR--- 421
Query: 193 EGRSEHERHVDDIQRDRH 246
+ R + +R D RDR+
Sbjct: 422 DDRRDRDRERDRNDRDRN 439
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 31.9 bits (69), Expect = 0.33
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 19 TRRCSHLLNTSRRHPSRSGDRDSNC*SSSTGLQQRDRRHA--HRATGQDEQGEATHRSAF 192
+R H N+ RR SRS DS S + ++R+RR + +R G HR
Sbjct: 365 SRHQRHRSNSKRRQRSRSRYDDSVYDSEADRERERERRRSKRNRQGGSQRSSSKKHR--- 421
Query: 193 EGRSEHERHVDDIQRDRH 246
+ R + +R D RDR+
Sbjct: 422 DDRRDRDRERDRNDRDRN 439
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 31.9 bits (69), Expect = 0.33
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 19 TRRCSHLLNTSRRHPSRSGDRDSNC*SSSTGLQQRDRRHA--HRATGQDEQGEATHRSAF 192
+R H N+ RR SRS DS S + ++R+RR + +R G HR
Sbjct: 359 SRHQRHRSNSKRRQRSRSRYDDSVYDSEADRERERERRRSKRNRQGGSQRSSSKKHR--- 415
Query: 193 EGRSEHERHVDDIQRDRH 246
+ R + +R D RDR+
Sbjct: 416 DDRRDRDRERDRNDRDRN 433
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 31.1 bits (67), Expect = 0.58
Identities = 23/63 (36%), Positives = 27/63 (42%)
Frame = +1
Query: 55 RHPSRSGDRDSNC*SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHERHVDDIQ 234
R SRS RD S +G + R RR R +D R GR + R DD Q
Sbjct: 156 RSRSRSRSRDRKRRRSRSGDRDRRRRSRSREDRRDRDRRDRDRDRDRGRGD--RRGDDRQ 213
Query: 235 RDR 243
RDR
Sbjct: 214 RDR 216
Score = 27.5 bits (58), Expect = 7.2
Identities = 23/70 (32%), Positives = 28/70 (40%)
Frame = +1
Query: 52 RRHPSRSGDRDSNC*SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHERHVDDI 231
+R SRSGDRD S S +RDR R +D +G R R +R D
Sbjct: 167 KRRRSRSGDRDRRRRSRSRE-DRRDRDRRDRDRDRD-RGRGDRRGDDRQRDRRDRRDDGG 224
Query: 232 QRDRHVPHHG 261
R V G
Sbjct: 225 ARKSEVAEIG 234
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 31.1 bits (67), Expect = 0.58
Identities = 23/63 (36%), Positives = 27/63 (42%)
Frame = +1
Query: 55 RHPSRSGDRDSNC*SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHERHVDDIQ 234
R SRS RD S +G + R RR R +D R GR + R DD Q
Sbjct: 156 RSRSRSRSRDRKRRRSRSGDRDRRRRSRSREDRRDRDRRDRDRDRDRGRGD--RRGDDRQ 213
Query: 235 RDR 243
RDR
Sbjct: 214 RDR 216
Score = 27.5 bits (58), Expect = 7.2
Identities = 23/70 (32%), Positives = 28/70 (40%)
Frame = +1
Query: 52 RRHPSRSGDRDSNC*SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHERHVDDI 231
+R SRSGDRD S S +RDR R +D +G R R +R D
Sbjct: 167 KRRRSRSGDRDRRRRSRSRE-DRRDRDRRDRDRDRD-RGRGDRRGDDRQRDRRDRRDDGG 224
Query: 232 QRDRHVPHHG 261
R V G
Sbjct: 225 ARKSEVAEIG 234
>Z82073-5|CAB63322.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.7 protein.
Length = 333
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 200 AQNTNAMLTTF-NEI-DMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALMDQPVV 373
A +T++ L F N + ++ +++ K L TF++ + LM PF+ + DQP V
Sbjct: 103 ALSTSSCLLLFCNSVFNIFNMLRNNKSWLRTFSEWLAWTFVLMFPFMSLLGFTIRDQPNV 162
Query: 374 NAVIEENEIIYRDYVD 421
A+ ++ Y D +D
Sbjct: 163 KALTKQISSYYPDCID 178
>Z74030-12|CAA98434.1| 320|Caenorhabditis elegans Hypothetical
protein D1054.14 protein.
Length = 320
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 46 TSRRHPSRSGDRDSNC*SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHERHVD 225
TSRR SRS DR+ + +++R++ R G DE G ++ S + R
Sbjct: 210 TSRRR-SRSRDRERDV-GDRREVREREKLKERRERGDDEPGPSSSGSGRRDDRDDRRRDR 267
Query: 226 DIQRDR 243
D RDR
Sbjct: 268 DRSRDR 273
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 29.9 bits (64), Expect = 1.3
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
Frame = +1
Query: 55 RHPSRS---GDRDSNC*SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHERHVD 225
RH SRS D S+ SS+ + +RR R ++ + + EH R D
Sbjct: 495 RHDSRSRRRRDSSSSSSMSSSSSDEDERRRKRREKESSKKRRSVEKERPRRADEHRRDRD 554
Query: 226 -DIQRDRHVPHHGIP*EAPRHLH*EAQHQTRSDVTFREGGRQRPDGPARGERCYRRKRDN 402
D +RDR H + + R +A R D +R D + ER +R+ ++
Sbjct: 555 RDRERDRDRSHRDVR-SSGRSKDIKASSSHRRDRDDARRKDRRRDDVRKKERREKREEED 613
>U21317-4|AAA62523.1| 719|Caenorhabditis elegans Hypothetical
protein B0495.2 protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Frame = +1
Query: 64 SRSGDRDSNC*SSSTGLQQR--DRRHAHRATGQDEQGEATHRSAFEGRSE-----HERHV 222
+R DRD +G Q+ + RH H + G T+RS + SE H+RH+
Sbjct: 109 ARQKDRDFKGRQERSGRDQKVHEHRHHHHHRKHETDGHRTNRSNRDRSSERDSEKHKRHI 168
Query: 223 D 225
D
Sbjct: 169 D 169
>U64844-2|AAO25987.1| 846|Caenorhabditis elegans Hypothetical
protein T22F3.3b protein.
Length = 846
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/59 (22%), Positives = 32/59 (54%)
Frame = +2
Query: 107 QDYSKEIAGTRTEQRVKMNRGRQRIAQRLKDAQNTNAMLTTFNEIDMSHIMAFRKKHLD 283
++Y+ + + +RVK+ +Q++AQ L D N N + ++ + I ++++ L+
Sbjct: 524 KEYANDAGFLDSIRRVKLEN-KQQVAQYLSDEYNVNVNAASLFDVHVKRIHEYKRQLLN 581
>U64844-1|AAK72092.1| 882|Caenorhabditis elegans Hypothetical
protein T22F3.3a protein.
Length = 882
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/59 (22%), Positives = 32/59 (54%)
Frame = +2
Query: 107 QDYSKEIAGTRTEQRVKMNRGRQRIAQRLKDAQNTNAMLTTFNEIDMSHIMAFRKKHLD 283
++Y+ + + +RVK+ +Q++AQ L D N N + ++ + I ++++ L+
Sbjct: 560 KEYANDAGFLDSIRRVKLEN-KQQVAQYLSDEYNVNVNAASLFDVHVKRIHEYKRQLLN 617
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +1
Query: 55 RHPSRSGDRDSNC*SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHE 213
RH + G+R N S Q R+RR H QG + G HE
Sbjct: 88 RHRNHDGNRHQNQDRSRHHNQDRNRRQNHDRNRHQSQGRNRQQDHERGDEAHE 140
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +1
Query: 55 RHPSRSGDRDSNC*SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHE 213
RH + G+R N S Q R+RR H QG + G HE
Sbjct: 932 RHRNHDGNRHQNQDRSRHHNQDRNRRQNHDRNRHQSQGRNRQQDHERGDEAHE 984
>AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical
protein C50D2.8 protein.
Length = 319
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +1
Query: 97 SSSTGLQQRDRRHAHRATGQDEQGEATHRSAFEGRSEHERHVDDIQRDRHV-PHHGIP*E 273
+ T ++R + A AT D + HRS RS H+ RDR HHG +
Sbjct: 252 AEETKRKERREKRAEAATTSDTE-RRRHRSRSPHRSSHDSRDSRDSRDRREHRHHGYDRD 310
Query: 274 APRH 285
H
Sbjct: 311 RRHH 314
>Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical
protein F57G4.1 protein.
Length = 838
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/71 (21%), Positives = 33/71 (46%)
Frame = +2
Query: 212 NAMLTTFNEIDMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALMDQPVVNAVIEE 391
N LT NE+ +L T+T S ++ P +++ A+ D ++N +I+
Sbjct: 472 NQFLTVENEVSFGFDCCDVDTNLCTYTLTFSDEMSADQPVLESQASTKNDPSIMNKLIDL 531
Query: 392 NEIIYRDYVDI 424
+ + +++I
Sbjct: 532 TSYLTKPFLNI 542
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,450,870
Number of Sequences: 27780
Number of extensions: 250925
Number of successful extensions: 968
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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