Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0643
         (434 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0C7Z7 Cluster: Chromosome undetermined scaffold_156, w...    37   0.16 
UniRef50_P74446 Cluster: Slr0147 protein; n=4; Chroococcales|Rep...    33   2.6  
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    31   8.0  

>UniRef50_A0C7Z7 Cluster: Chromosome undetermined scaffold_156,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_156,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 232

 Score = 37.1 bits (82), Expect = 0.16
 Identities = 24/75 (32%), Positives = 40/75 (53%)
 Frame = +1

Query: 148 CLIGSLWGSKIYKLFRKIIQLEDRFGKPIQLIHLFNITQLHKYFYVELIVCGFV*NDQVT 327
           CL+  L+   I   F K ++++D+FG   ++  +FN  QL+   Y+  I+  F+  DQ+T
Sbjct: 154 CLLLKLFLKNIE--FYKHLEMKDQFGNQFRINQMFN--QLNGERYLNFIIQFFIIQDQIT 209

Query: 328 YKKKTTTKCLASNLF 372
            K+ T    L   LF
Sbjct: 210 NKQLTLEHMLHFKLF 224


>UniRef50_P74446 Cluster: Slr0147 protein; n=4; Chroococcales|Rep:
           Slr0147 protein - Synechocystis sp. (strain PCC 6803)
          Length = 292

 Score = 33.1 bits (72), Expect = 2.6
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 157 GSLWGSKIYKLFRKIIQLEDRFGKPIQLIHLFNITQLHK 273
           G  WGS  YK F    +L++ +GKPIQ + +    Q  K
Sbjct: 143 GKTWGSAFYKRFAD--ELQEYYGKPIQAMEMVEFLQTFK 179


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +3

Query: 396 GGARYPIRPIVSR 434
           GGARYPIRPIVSR
Sbjct: 261 GGARYPIRPIVSR 273


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 425,001,040
Number of Sequences: 1657284
Number of extensions: 7728384
Number of successful extensions: 16760
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16759
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)