Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0643
         (434 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1507 + 34056434-34056502,34056724-34057161,34057237-34057881     28   3.8  
02_01_0752 - 5583757-5584092                                           27   8.7  

>04_04_1507 + 34056434-34056502,34056724-34057161,34057237-34057881
          Length = 383

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -1

Query: 191 NSLYILLPHNEPIKHQEQESGRTTIRSNPSDACFHHFLFICLQRRIPLGVTSYDLNWLAR 12
           N+L+ LLPH       E   GR    +      FH  LF   +R I +  +++ L+WL++
Sbjct: 112 NTLFGLLPHRGAASSGEGGRGRRHYFAAAVPGSFHDRLF--PERSIDVFTSTFCLHWLSQ 169


>02_01_0752 - 5583757-5584092
          Length = 111

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = +1

Query: 37  DVTPSGIRRCRQINKKWWKHASDGFDRIVVLPDSCS*CLIGSLWG 171
           +V P+G RR R     WW  ASD   +I  L D  +    GS WG
Sbjct: 3   NVPPAGGRRQRA----WWWGASDTDTQIQALTDGYNVGEGGSYWG 43


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,320,694
Number of Sequences: 37544
Number of extensions: 204594
Number of successful extensions: 455
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 826450812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)