Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0643
         (434 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119653-1|AAM50307.1|  682|Drosophila melanogaster RE71324p pro...    28   6.3  
AE014297-4280|AAF56827.1|  682|Drosophila melanogaster CG14528-P...    28   6.3  
AY122074-1|AAM52586.1|  994|Drosophila melanogaster AT16994p pro...    27   8.3  
AE014298-1046|AAG22412.1|  667|Drosophila melanogaster CG11369-P...    27   8.3  
AE013599-641|AAF59100.3|  994|Drosophila melanogaster CG11641-PA...    27   8.3  

>AY119653-1|AAM50307.1|  682|Drosophila melanogaster RE71324p
           protein.
          Length = 682

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 151 LIGSLWGSKIYKLFRKIIQLEDRFGKPI 234
           L+G+ W S  +  +R + Q++ ++GK I
Sbjct: 151 LVGAQWNSSDFSWWRTVAQIQHKYGKQI 178


>AE014297-4280|AAF56827.1|  682|Drosophila melanogaster CG14528-PA
           protein.
          Length = 682

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 151 LIGSLWGSKIYKLFRKIIQLEDRFGKPI 234
           L+G+ W S  +  +R + Q++ ++GK I
Sbjct: 151 LVGAQWNSSDFSWWRTVAQIQHKYGKQI 178


>AY122074-1|AAM52586.1|  994|Drosophila melanogaster AT16994p
           protein.
          Length = 994

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +1

Query: 19  NQFRSYDVTPSGIRRCRQINKKWWKHASD 105
           N F   D+TP   ++ + + ++W K A +
Sbjct: 875 NMFEKLDITPKSAQKIKPVLERWMKEAEE 903


>AE014298-1046|AAG22412.1|  667|Drosophila melanogaster CG11369-PA
           protein.
          Length = 667

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -1

Query: 170 PHNE-PIKHQEQESGRTTIR-SNPSDACFHHFLFICLQRRIPLGVTSYDLNWLAR 12
           PH    +K+Q   +G T +  S PS+      +   +++++PL   SYD  W+ +
Sbjct: 314 PHKTLNVKNQRIRAGDTKMATSKPSEKIKSRSMLRTVKKKLPLPQRSYDKPWILK 368


>AE013599-641|AAF59100.3|  994|Drosophila melanogaster CG11641-PA
           protein.
          Length = 994

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +1

Query: 19  NQFRSYDVTPSGIRRCRQINKKWWKHASD 105
           N F   D+TP   ++ + + ++W K A +
Sbjct: 875 NMFEKLDITPKSAQKIKPVLERWMKEAEE 903


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,138,442
Number of Sequences: 53049
Number of extensions: 359990
Number of successful extensions: 657
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)