Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0641
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.2  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   5.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   9.6  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -1

Query: 633 PRSCPRETYDSQHRY 589
           P   P E YD QH Y
Sbjct: 104 PGQSPAEKYDQQHLY 118


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
 Frame = -2

Query: 662 LRYFGVSFVLRDPAQ---GRPMI 603
           L ++G +F L DPAQ   G P+I
Sbjct: 257 LAFYGHTFQLADPAQHDLGAPVI 279


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 322 EPRIFGSKVPFPERSMCKPAS 260
           E RIFG     P+RS  +P+S
Sbjct: 296 ESRIFGLVTFTPDRSKFRPSS 316


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 334 IVKTEPRIFGSKVPFPERSMCKPAS 260
           I+  + RIFG     P+RS  +P+S
Sbjct: 17  ILLFQSRIFGLVTFTPDRSKFRPSS 41


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +3

Query: 450 EAVASYQNNTRAASNDHYHRASETTGP 530
           EA A+Y +++ + S+  +  +S +T P
Sbjct: 30  EAPAAYSSSSPSGSSPQHSSSSASTSP 56


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +3

Query: 450 EAVASYQNNTRAASNDHYHRASETTGP 530
           EA A+Y +++ + S+  +  +S +T P
Sbjct: 30  EAPAAYSSSSPSGSSPQHSSSSASTSP 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,445
Number of Sequences: 336
Number of extensions: 4048
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)