Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0641
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55366-1|AAA97980.2| 430|Caenorhabditis elegans Suppressor of c... 46 3e-05
AF419335-1|AAL15971.1| 430|Caenorhabditis elegans multisubstrat... 46 3e-05
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 33 0.26
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 30 1.4
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 30 1.4
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 30 1.4
Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical p... 29 4.2
Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical p... 29 4.2
AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical ... 29 4.2
AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical ... 29 4.2
AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical ... 29 4.2
AF016681-5|AAK68345.1| 144|Caenorhabditis elegans Hypothetical ... 29 4.2
Z81094-6|CAB03154.1| 666|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 28 7.3
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 28 7.3
Z81128-10|CAB03395.3| 467|Caenorhabditis elegans Hypothetical p... 27 9.7
Z81033-3|CAD36479.1| 467|Caenorhabditis elegans Hypothetical pr... 27 9.7
U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical pr... 27 9.7
U97004-5|AAO26009.1| 240|Caenorhabditis elegans Hypothetical pr... 27 9.7
U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical pr... 27 9.7
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 27 9.7
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 27 9.7
AL023824-1|CAD36497.1| 467|Caenorhabditis elegans Hypothetical ... 27 9.7
AF487547-1|AAL93258.1| 467|Caenorhabditis elegans ARID DNA bind... 27 9.7
>U55366-1|AAA97980.2| 430|Caenorhabditis elegans Suppressor of clr
protein 1 protein.
Length = 430
Score = 45.6 bits (103), Expect = 3e-05
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Frame = +3
Query: 54 TIMSKNIVFEGWLTKSPPTKRIFRTKWQKRWFALRQSGELPGQYFLDYYSDRNCRRHKGT 233
+I +NI+ EG L + K +F+TKW + +F L + +D + K
Sbjct: 2 SIPDENIILEGSLKRCKKYK-LFKTKWVEHYFVLHCRDRERNLFAIDEFKTSRKNDLKKR 60
Query: 234 INLDLCEQVDAGLHME------RSGNGTLDPKIRGSVFTI----QTQTRTYHLEAECEAE 383
L+ +V++ L + +G G + + +F + + + +L A+ + E
Sbjct: 61 FKLEFVIRVESNLSVSDPSILCTAGGGHQEESMLNCIFGVGFRFENIVKDLYLVAKNDEE 120
Query: 384 MEKWVDVICRVCGLRSTDDD 443
M WV+ IC++C L D+
Sbjct: 121 MTLWVNEICKLCKLHRQHDE 140
>AF419335-1|AAL15971.1| 430|Caenorhabditis elegans multisubstrate
adaptor proteinSOC-1 protein.
Length = 430
Score = 45.6 bits (103), Expect = 3e-05
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Frame = +3
Query: 54 TIMSKNIVFEGWLTKSPPTKRIFRTKWQKRWFALRQSGELPGQYFLDYYSDRNCRRHKGT 233
+I +NI+ EG L + K +F+TKW + +F L + +D + K
Sbjct: 2 SIPDENIILEGSLKRCKKYK-LFKTKWVEHYFVLHCRDRERNLFAIDEFKTSRKNDLKKR 60
Query: 234 INLDLCEQVDAGLHME------RSGNGTLDPKIRGSVFTI----QTQTRTYHLEAECEAE 383
L+ +V++ L + +G G + + +F + + + +L A+ + E
Sbjct: 61 FKLEFVIRVESNLSVSDPSILCTAGGGHQEESMLNCIFGVGFRFENIVKDLYLVAKNDEE 120
Query: 384 MEKWVDVICRVCGLRSTDDD 443
M WV+ IC++C L D+
Sbjct: 121 MTLWVNEICKLCKLHRQHDE 140
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical protein
W02B8.2 protein.
Length = 1256
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 282 RSGNGTLDP-KIRGSVFTIQTQTRTYHLEAECEAEMEKWVDVICRVCGLRSTDDDRPEAV 458
R+G P + +V TI+ QTR+ H+ A E+W + R + +P ++
Sbjct: 869 RTGQEVAIPGDVMRNVLTIKLQTRSVHIVAPTPKSAERWAACLQNAQTRRMMKNSKPSSI 928
Query: 459 ASY 467
A Y
Sbjct: 929 AEY 931
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
defective protein 27,isoform b protein.
Length = 1124
Score = 30.3 bits (65), Expect = 1.4
Identities = 31/104 (29%), Positives = 45/104 (43%)
Frame = +3
Query: 174 PGQYFLDYYSDRNCRRHKGTINLDLCEQVDAGLHMERSGNGTLDPKIRGSVFTIQTQTRT 353
P Y L SDRNCR + + D+ L +S +GTL ++R SVF +Q
Sbjct: 52 PCYYSLTGKSDRNCR------GIVYRYRQDSDLKGFQSHDGTLY-RLRDSVFVEVSQNEP 104
Query: 354 YHLEAECEAEMEKWVDVICRVCGLRSTDDDRPEAVASYQNNTRA 485
Y + A C + K V+ ++ DD PE + RA
Sbjct: 105 YVIAAICGFKYTKRDHVVVKLTRYFRA-DDIPEISLNLMKQERA 147
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
defective protein 27,isoform a protein.
Length = 1129
Score = 30.3 bits (65), Expect = 1.4
Identities = 31/104 (29%), Positives = 45/104 (43%)
Frame = +3
Query: 174 PGQYFLDYYSDRNCRRHKGTINLDLCEQVDAGLHMERSGNGTLDPKIRGSVFTIQTQTRT 353
P Y L SDRNCR + + D+ L +S +GTL ++R SVF +Q
Sbjct: 52 PCYYSLTGKSDRNCR------GIVYRYRQDSDLKGFQSHDGTLY-RLRDSVFVEVSQNEP 104
Query: 354 YHLEAECEAEMEKWVDVICRVCGLRSTDDDRPEAVASYQNNTRA 485
Y + A C + K V+ ++ DD PE + RA
Sbjct: 105 YVIAAICGFKYTKRDHVVVKLTRYFRA-DDIPEISLNLMKQERA 147
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 30.3 bits (65), Expect = 1.4
Identities = 31/104 (29%), Positives = 45/104 (43%)
Frame = +3
Query: 174 PGQYFLDYYSDRNCRRHKGTINLDLCEQVDAGLHMERSGNGTLDPKIRGSVFTIQTQTRT 353
P Y L SDRNCR + + D+ L +S +GTL ++R SVF +Q
Sbjct: 52 PCYYSLTGKSDRNCR------GIVYRYRQDSDLKGFQSHDGTLY-RLRDSVFVEVSQNEP 104
Query: 354 YHLEAECEAEMEKWVDVICRVCGLRSTDDDRPEAVASYQNNTRA 485
Y + A C + K V+ ++ DD PE + RA
Sbjct: 105 YVIAAICGFKYTKRDHVVVKLTRYFRA-DDIPEISLNLMKQERA 147
>Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 60 MSKNIVFEGWLTKSPPT-----KRIFRTKWQKRWFALRQSGELPGQYFLDYYSDRNCRRH 224
M++ + G+L +PP + +WQ+RWF L SG+L Y +D D
Sbjct: 37 MNRKVTACGFLYVAPPNLDFSMQSHSAKRWQRRWFTLFDSGDL--TYAIDNSMD---TLP 91
Query: 225 KGTINLDLCEQV 260
+ +I++ LC +V
Sbjct: 92 QLSIDMSLCYRV 103
>Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 60 MSKNIVFEGWLTKSPPT-----KRIFRTKWQKRWFALRQSGELPGQYFLDYYSDRNCRRH 224
M++ + G+L +PP + +WQ+RWF L SG+L Y +D D
Sbjct: 37 MNRKVTACGFLYVAPPNLDFSMQSHSAKRWQRRWFTLFDSGDL--TYAIDNSMD---TLP 91
Query: 225 KGTINLDLCEQV 260
+ +I++ LC +V
Sbjct: 92 QLSIDMSLCYRV 103
>AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 60 MSKNIVFEGWLTKSPPT-----KRIFRTKWQKRWFALRQSGELPGQYFLDYYSDRNCRRH 224
M++ + G+L +PP + +WQ+RWF L SG+L Y +D D
Sbjct: 37 MNRKVTACGFLYVAPPNLDFSMQSHSAKRWQRRWFTLFDSGDL--TYAIDNSMD---TLP 91
Query: 225 KGTINLDLCEQV 260
+ +I++ LC +V
Sbjct: 92 QLSIDMSLCYRV 103
>AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 60 MSKNIVFEGWLTKSPPT-----KRIFRTKWQKRWFALRQSGELPGQYFLDYYSDRNCRRH 224
M++ + G+L +PP + +WQ+RWF L SG+L Y +D D
Sbjct: 37 MNRKVTACGFLYVAPPNLDFSMQSHSAKRWQRRWFTLFDSGDL--TYAIDNSMD---TLP 91
Query: 225 KGTINLDLCEQV 260
+ +I++ LC +V
Sbjct: 92 QLSIDMSLCYRV 103
>AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical
protein F56A11.6 protein.
Length = 442
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = -2
Query: 578 VVLIAHASDTFRNRYVWA 525
+VL AHA+D+F++ +VWA
Sbjct: 29 LVLFAHANDSFKDGHVWA 46
>AF016681-5|AAK68345.1| 144|Caenorhabditis elegans Hypothetical
protein F22E5.7 protein.
Length = 144
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 266 WFTHGTFWEWDFRSEDPWLSFHYSNSNE 349
W++H + WE D + D L++ S NE
Sbjct: 41 WYSHASMWEKDSLTPDDLLAYEGSTRNE 68
>Z81094-6|CAB03154.1| 666|Caenorhabditis elegans Hypothetical
protein F58G11.3a protein.
Length = 666
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = +3
Query: 462 SYQNNTRAASNDHYHRASETTGPYIPISECITGVRDQDDQRHGTGVGNHRSPLGRIS--- 632
SY + +AAS + + + P+ +S + G GNH S G+ S
Sbjct: 142 SYASFGKAASKKLFQNFGQPSRPFSVLS---SSKASTSSAIQSFGTGNHDSTFGKSSGSN 198
Query: 633 ENKTNPEVPQSTADPYNR 686
N TNP V S P R
Sbjct: 199 ANPTNPPVAPSIQRPLMR 216
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 147 FALRQSGELPGQYFLDYYS-DRNCRRHKGTINLDLCEQVDAGLHMERSGNGTLD 305
F ++ GE P ++F +R G + L CE+ D GL + +GN D
Sbjct: 1747 FQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGISLAGNKDRD 1800
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 147 FALRQSGELPGQYFLDYYS-DRNCRRHKGTINLDLCEQVDAGLHMERSGNGTLD 305
F ++ GE P ++F +R G + L CE+ D GL + +GN D
Sbjct: 1769 FQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGISLAGNKDRD 1822
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 147 FALRQSGELPGQYFLDYYS-DRNCRRHKGTINLDLCEQVDAGLHMERSGNGTLD 305
F ++ GE P ++F +R G + L CE+ D GL + +GN D
Sbjct: 1560 FQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGISLAGNKDRD 1613
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 147 FALRQSGELPGQYFLDYYS-DRNCRRHKGTINLDLCEQVDAGLHMERSGNGTLD 305
F ++ GE P ++F +R G + L CE+ D GL + +GN D
Sbjct: 1867 FQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGISLAGNKDRD 1920
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 147 FALRQSGELPGQYFLDYYS-DRNCRRHKGTINLDLCEQVDAGLHMERSGNGTLD 305
F ++ GE P ++F +R G + L CE+ D GL + +GN D
Sbjct: 1747 FQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGISLAGNKDRD 1800
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 147 FALRQSGELPGQYFLDYYS-DRNCRRHKGTINLDLCEQVDAGLHMERSGNGTLD 305
F ++ GE P ++F +R G + L CE+ D GL + +GN D
Sbjct: 1769 FQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGISLAGNKDRD 1822
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 147 FALRQSGELPGQYFLDYYS-DRNCRRHKGTINLDLCEQVDAGLHMERSGNGTLD 305
F ++ GE P ++F +R G + L CE+ D GL + +GN D
Sbjct: 1560 FQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGISLAGNKDRD 1613
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 147 FALRQSGELPGQYFLDYYS-DRNCRRHKGTINLDLCEQVDAGLHMERSGNGTLD 305
F ++ GE P ++F +R G + L CE+ D GL + +GN D
Sbjct: 1867 FQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGISLAGNKDRD 1920
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 147 FALRQSGELPGQYFLDYYS-DRNCRRHKGTINLDLCEQVDAGLHMERSGNGTLD 305
F ++ GE P ++F +R G + L CE+ D GL + +GN D
Sbjct: 1578 FQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGISLAGNKDRD 1631
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 147 FALRQSGELPGQYFLDYYS-DRNCRRHKGTINLDLCEQVDAGLHMERSGNGTLD 305
F ++ GE P ++F +R G + L CE+ D GL + +GN D
Sbjct: 1538 FQIKNDGEEPSKFFYTAGKIERKYDSDGGELVLVACERPDGGLGISLAGNKDRD 1591
>Z81128-10|CAB03395.3| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 246 LCEQVDAGLHMERSGNGTLDPKIRGSVFTIQTQTRTYHLEAECEAE 383
L E ++ L E + L I + FT++TQ + Y + ECE E
Sbjct: 228 LVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKYLYDYECEKE 273
>Z81033-3|CAD36479.1| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 246 LCEQVDAGLHMERSGNGTLDPKIRGSVFTIQTQTRTYHLEAECEAE 383
L E ++ L E + L I + FT++TQ + Y + ECE E
Sbjct: 228 LVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKYLYDYECEKE 273
>U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical
protein R08E5.2c protein.
Length = 304
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -2
Query: 662 LRYFGVSFVLRDPAQGRP-MIPNTGTVPLVVLIAHASDTFRNRYVWASGFRS 510
LR +G +L DPA+G P +I + + AH D F N A+ +R+
Sbjct: 110 LRAYGAEVILSDPAEGHPGVIKKVEMLVDKLPNAHCLDQFSNPANPAAHYRT 161
>U97004-5|AAO26009.1| 240|Caenorhabditis elegans Hypothetical
protein R08E5.2b protein.
Length = 240
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -2
Query: 662 LRYFGVSFVLRDPAQGRP-MIPNTGTVPLVVLIAHASDTFRNRYVWASGFRS 510
LR +G +L DPA+G P +I + + AH D F N A+ +R+
Sbjct: 13 LRAYGAEVILSDPAEGHPGVIKKVEMLVDKLPNAHCLDQFSNPANPAAHYRT 64
>U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical
protein R08E5.2a protein.
Length = 337
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -2
Query: 662 LRYFGVSFVLRDPAQGRP-MIPNTGTVPLVVLIAHASDTFRNRYVWASGFRS 510
LR +G +L DPA+G P +I + + AH D F N A+ +R+
Sbjct: 110 LRAYGAEVILSDPAEGHPGVIKKVEMLVDKLPNAHCLDQFSNPANPAAHYRT 161
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 54 TIMSKNIVFEGWLTKSPPTKRIFRTKWQKRWFALRQ 161
++ +++I EGWL+ TK+ + KW + AL +
Sbjct: 945 SLSNQHIQMEGWLSLRDNTKKSRKPKWTNCFVALNE 980
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 54 TIMSKNIVFEGWLTKSPPTKRIFRTKWQKRWFALRQ 161
++ +++I EGWL+ TK+ + KW + AL +
Sbjct: 945 SLSNQHIQMEGWLSLRDNTKKSRKPKWTNCFVALNE 980
>AL023824-1|CAD36497.1| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 246 LCEQVDAGLHMERSGNGTLDPKIRGSVFTIQTQTRTYHLEAECEAE 383
L E ++ L E + L I + FT++TQ + Y + ECE E
Sbjct: 228 LVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKYLYDYECEKE 273
>AF487547-1|AAL93258.1| 467|Caenorhabditis elegans ARID DNA binding
protein CFI-1 protein.
Length = 467
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 246 LCEQVDAGLHMERSGNGTLDPKIRGSVFTIQTQTRTYHLEAECEAE 383
L E ++ L E + L I + FT++TQ + Y + ECE E
Sbjct: 228 LVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKYLYDYECEKE 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,986,654
Number of Sequences: 27780
Number of extensions: 386982
Number of successful extensions: 1043
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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