Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0640
         (538 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    27   0.14 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          27   0.14 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   1.7  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    23   1.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   3.0  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    22   3.0  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   3.0  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   3.9  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   6.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.9  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   9.1  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   9.1  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   9.1  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   9.1  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 327 CSYDVLSQFHFQSPTVHFA*KYNVLY 250
           C YD  S + F  P  +F  +YN  Y
Sbjct: 196 CQYDTESSYQFNDPQFNFNYQYNQAY 221


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 327 CSYDVLSQFHFQSPTVHFA*KYNVLY 250
           C YD  S + F  P  +F  +YN  Y
Sbjct: 216 CQYDTESSYQFNDPQFNFNYQYNQAY 241


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +3

Query: 192 RSDRSLWTNYNRIKLIRLLHKVHYIFTRNAL 284
           R  R  +T Y  ++L +  H  HY+  R  +
Sbjct: 224 RRGRQTYTRYQTLELEKEFHTNHYLTRRRRI 254


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +3

Query: 192 RSDRSLWTNYNRIKLIRLLHKVHYIFTRNAL 284
           R  R  +T Y  ++L +  H  HY+  R  +
Sbjct: 6   RRGRQTYTRYQTLELEKEFHTNHYLTRRRRI 36


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
 Frame = -3

Query: 347 HLFSSFVVHTM---FCHNFIF 294
           H F +F++ TM   FC  FIF
Sbjct: 168 HFFCAFIIFTMHLLFCCAFIF 188


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 374 VNTLLNHASHLFSSFVVHTMFCHNFIFN 291
           +NT L H++HL    V      HN I N
Sbjct: 194 LNTSLIHSTHLNGDIVKEHQNLHNKICN 221


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/35 (22%), Positives = 16/35 (45%)
 Frame = -3

Query: 392 GLITKIVNTLLNHASHLFSSFVVHTMFCHNFIFNR 288
           G ++ ++  +  + SH   S+V        F+F R
Sbjct: 78  GDVSSVLKFIRKYGSHFIESYVTGNALYQVFVFRR 112


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 13/46 (28%), Positives = 19/46 (41%)
 Frame = +3

Query: 357 IEKRINNFSY*SSLSSRNFDLNH*CFKSYIHLRSFIFWLGIHIFSS 494
           + K+I NF Y    S  N D  +        LR  IF +  H  ++
Sbjct: 347 VAKKIRNFYYGGPNSENNLDNFYLIHTDTYFLRDIIFAIRQHAITA 392


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/31 (29%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 162 EWTNSK-IYRARSDRSLWTNYNRIKLIRLLH 251
           ++ N K ++R+  D    T Y+ + + R+LH
Sbjct: 18  DFVNGKTLHRSTRDDKYTTRYDNVDVDRILH 48


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 53  KREWIKKMEAKRD 91
           K++W K++EAK D
Sbjct: 96  KQDWWKQLEAKYD 108


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 116  WAVDESQRPSSCQDXGVDKLKDLPGSFR 199
            W VD ++ P+S +    D +K+L  +F+
Sbjct: 1950 WQVDCNKGPASDKSAFADFVKELHEAFK 1977


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 53  KREWIKKMEAKRD 91
           KR+W  ++EAK D
Sbjct: 95  KRDWWNELEAKYD 107


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 53  KREWIKKMEAKRD 91
           KR+W  ++EAK D
Sbjct: 97  KRDWWNELEAKYD 109


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 158 RPDNWRAVEIRRPP 117
           +PD W+A+E +  P
Sbjct: 99  KPDYWKALEAKYDP 112


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 53  KREWIKKMEAKRD 91
           KR+W  ++EAK D
Sbjct: 95  KRDWWNELEAKYD 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,553
Number of Sequences: 336
Number of extensions: 2964
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)