Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0640
         (538 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    24   2.8  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        23   4.9  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   6.5  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   6.5  
DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.    23   8.6  

>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 162 EWTNSKIYRARSDRSLWTNYNRIKLIRLLHKVHYIFTRNAL 284
           +W  +   R R  R  +T Y  ++L +  H  HY+  R  +
Sbjct: 228 DWIGANGLRRRG-RQTYTRYQTLELEKEFHTNHYLTRRRRI 267


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 10  PSELRRQSWLRRTNQKGMD*EDG 78
           P + RR  W R+T  +  D EDG
Sbjct: 167 PIDSRRDQWRRQTCPRDDDYEDG 189


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 346 WEA*LRSVLTILVINPH*VVGISTLIIDASRATFI 450
           WE      L  L +    V  +STLI+D  RA F+
Sbjct: 482 WETMFGQELAKLTVMDLLVTIVSTLILDFLRALFV 516


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +3

Query: 192 RSDRSLWTNYNRIKLIRLLHKVHYIFTRNAL 284
           R  R  +T Y  ++L +  H  HY+  R  +
Sbjct: 220 RRGRQTYTRYQTLELEKEFHTNHYLTRRRRI 250


>DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 6   TAFRTTAAKLAPSNKSKGNGL 68
           + F TTA + A  N+SK  GL
Sbjct: 52  SGFNTTAVRSAKKNRSKYYGL 72


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,207
Number of Sequences: 2352
Number of extensions: 10665
Number of successful extensions: 76
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)