BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0640 (538 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC113891-1|AAI13892.1| 1722|Homo sapiens TRIP12 protein protein. 30 6.0 >BC113891-1|AAI13892.1| 1722|Homo sapiens TRIP12 protein protein. Length = 1722 Score = 29.9 bits (64), Expect = 6.0 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%) Frame = +3 Query: 168 TNSKIYRARSDRSLWTNYNRI--KLIRLLHKV 257 T+ I++ R DR LW YNRI ++I H+V Sbjct: 461 TDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQV 492 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 77,135,250 Number of Sequences: 237096 Number of extensions: 1465093 Number of successful extensions: 6036 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 6007 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6036 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 5273648886 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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