Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0636
         (645 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7D8C Cluster: PREDICTED: hypothetical protein;...    36   1.1  
UniRef50_A4QYK5 Cluster: Putative uncharacterized protein; n=1; ...    33   5.9  
UniRef50_A0B7A4 Cluster: PHP C-terminal domain protein; n=1; Met...    33   5.9  
UniRef50_Q8IJC3 Cluster: Protoporphyrinogen oxidase, putative; n...    33   7.8  
UniRef50_Q23I77 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  
UniRef50_Q4P9P2 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  

>UniRef50_UPI0000DB7D8C Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 312

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 16/32 (50%), Positives = 23/32 (71%)
 Frame = -3

Query: 532 LVSGLLVPRLGNRFRFDLHVIIV*VGAVLQCS 437
           LVSG+++ R+G RF   L +I+V +G VL CS
Sbjct: 79  LVSGVMLDRIGPRFTASLGIILVAIGCVLFCS 110


>UniRef50_A4QYK5 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 352

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +3

Query: 501 PRRGTKSPETRREGSHSCTSLLTGFDGRRNSFKGVVFSPPLKHYRG 638
           P R +K+P T +    + T++LTG   +RN+      +PP K  RG
Sbjct: 112 PGRPSKTPRTEKASKGAKTAVLTGSARKRNADAATNDAPPAKRARG 157


>UniRef50_A0B7A4 Cluster: PHP C-terminal domain protein; n=1;
           Methanosaeta thermophila PT|Rep: PHP C-terminal domain
           protein - Methanosaeta thermophila (strain DSM 6194 /
           PT) (Methanothrixthermophila (strain DSM 6194 / PT))
          Length = 216

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = +1

Query: 124 YIIGVS-AKQMFSFSMRQ----GGGDAHVRHEVGDGVTGPPHAACSEEHELDNIPLTETS 288
           YI+G+S  + M     R+     G DAHV   VG GVT     A SE+  LD I    T 
Sbjct: 131 YILGLSNLRAMLEARRRRIPMVAGSDAHVAETVGLGVT--ILNAASEDDVLDEIRKNRTR 188

Query: 289 VWCC 300
           + CC
Sbjct: 189 IDCC 192


>UniRef50_Q8IJC3 Cluster: Protoporphyrinogen oxidase, putative; n=1;
           Plasmodium falciparum 3D7|Rep: Protoporphyrinogen
           oxidase, putative - Plasmodium falciparum (isolate 3D7)
          Length = 609

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +1

Query: 253 HELDNIPLTETSVWCCNIQK*NYIKLIYPSNDFYSLNKSH*KSIFFCAAILKSIL 417
           HE+D I     ++W CNI+  N  K IY  N   ++N         C+ I+++IL
Sbjct: 381 HEVDFIEKAYNNLWMCNIKHENQNKTIYGKNIVLAVNSK------ICSNIMRNIL 429


>UniRef50_Q23I77 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1186

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 19/61 (31%), Positives = 24/61 (39%)
 Frame = -3

Query: 430 YCSDSKSISKWRRKRIYFFSVIC*DCRNHLKDKSV*CNFIFEYCNTTRSSLSRECCQVRV 251
           YC  S S S W ++  Y     C  C   L    + C  IF + N     LS   C V+ 
Sbjct: 692 YCQSSSSASPWYQQDCYPCDQSCLQCSGPLSTNCLSCTTIFPFYN-----LSNNSCLVQA 746

Query: 250 P 248
           P
Sbjct: 747 P 747


>UniRef50_Q4P9P2 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 347

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +1

Query: 115 LINYIIGVSAK-QMFSFSMRQGGGDAHVRHEVGDGVTGPPHAACSEEHEL 261
           L  Y + V+ K Q+  F    G   AH  HE+ D V   P   C+E  +L
Sbjct: 264 LDQYDLPVNGKRQLLGFPDLDGADPAHSAHEISDNVDDTPKLGCNETRKL 313


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,365,264
Number of Sequences: 1657284
Number of extensions: 12244319
Number of successful extensions: 26937
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26930
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)