Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0636
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   3.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.6  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.7  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   8.7  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   8.7  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -3

Query: 448 LQCSKNYCSDSKSISKWRRKRIYFFSVIC*DCRNHLKDKSV*CNFIFEY 302
           L CSKN         K + K  Y ++ +      +  +K +  N I+EY
Sbjct: 64  LDCSKNSPEKESEEKKSKEKPPYSYNALIMMAIRNSPEKRLTLNGIYEY 112


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = -1

Query: 618  GGKKLPL*NCCAYRQNPSKVKYNCDYPPVSSQDS*SLVSGTVSDLTC 478
            G  K PL N         KVK   D P  +S  S    +   +++TC
Sbjct: 869  GSGKYPLINAMRQELEGYKVKLEYDGPYETSISSGQYTTKDPNEVTC 915


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 218 TPSPTSCLTWASPPP 174
           TP+PTS +T   P P
Sbjct: 312 TPTPTSVMTELYPSP 326


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 582 YRQNPSKVKYNCDYPP 535
           YR  PSK KY+  + P
Sbjct: 125 YRIKPSKPKYDVTWDP 140


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 552 NCDYPPVSSQDS 517
           +C Y PVS+ DS
Sbjct: 40  SCQYSPVSNSDS 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,655
Number of Sequences: 336
Number of extensions: 3291
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)