Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0636
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           25   2.0  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           25   2.0  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    25   2.7  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   8.3  

>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 218 TPSPTSCLTWASPPP 174
           TP+PT+  TW+  PP
Sbjct: 198 TPAPTTTTTWSDLPP 212


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 218 TPSPTSCLTWASPPP 174
           TP+PT+  TW+  PP
Sbjct: 198 TPAPTTTTTWSDLPP 212


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 543 SHSCTSLLTGFDGRRNSFKGVVFSPPLK 626
           S S  S + GFDG  N   G +F+ P+K
Sbjct: 157 SASKYSYIGGFDGTSNVLAGKLFNIPVK 184


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
 Frame = -3

Query: 604  TPLKLLRLPSKPVKSEVQL*LPSRLVSGLLVPRLGNRF---RFDLHVIIV*VGAVLQCSK 434
            T LKL   P    +  + L +    ++ +L  R G  +   R D   ++  +GA  +C +
Sbjct: 1547 TSLKLRVTPKTSAREVIDLVVKQLNMAVVLKGREGPIYSSERLDNFCLVAVIGARERCLR 1606

Query: 433  NYCSDSKSISKWRRKRIY 380
            +     +  + WR+ R+Y
Sbjct: 1607 DDFRPLQLQNPWRKGRLY 1624


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,199
Number of Sequences: 2352
Number of extensions: 12872
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)