Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0636
         (645 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92789-8|CAB07222.3|  495|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z68336-9|CAA92741.3|  495|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AC006720-7|AAF60444.1|  511|Caenorhabditis elegans Cytochrome p4...    28   4.9  

>Z92789-8|CAB07222.3|  495|Caenorhabditis elegans Hypothetical
           protein H02I12.8 protein.
          Length = 495

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 227 GPVTPSPTSCLTWASPPPCLI 165
           G + P P  CL W  P PCL+
Sbjct: 63  GYLYPDPRMCLLWIGPFPCLM 83


>Z68336-9|CAA92741.3|  495|Caenorhabditis elegans Hypothetical
           protein H02I12.8 protein.
          Length = 495

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 227 GPVTPSPTSCLTWASPPPCLI 165
           G + P P  CL W  P PCL+
Sbjct: 63  GYLYPDPRMCLLWIGPFPCLM 83


>AC006720-7|AAF60444.1|  511|Caenorhabditis elegans Cytochrome p450
           family protein 31A3 protein.
          Length = 511

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 227 GPVTPSPTSCLTWASPPPCLI 165
           G + P P  CL W  P PCL+
Sbjct: 63  GYLYPDPRMCLLWIGPFPCLM 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,660,349
Number of Sequences: 27780
Number of extensions: 306809
Number of successful extensions: 603
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)