Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0634
(471 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 115 4e-27
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 85 4e-18
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 81 1e-16
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 79 4e-16
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 77 1e-15
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 75 5e-15
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 73 2e-14
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 66 3e-12
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 60 1e-10
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 56 3e-09
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 55 5e-09
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 54 1e-08
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 54 1e-08
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 53 3e-08
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 49 4e-07
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 46 2e-06
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 42 5e-05
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 39 4e-04
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 33 0.022
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 30 0.20
SPBC1271.12 |kes1||oxysterol binding protein |Schizosaccharomyce... 29 0.36
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 27 1.4
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 26 3.3
SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 4.4
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 25 4.4
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 25 4.4
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 25 5.8
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 25 5.8
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 25 5.8
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 25 5.8
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma... 25 5.8
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 25 7.7
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 25 7.7
SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual 25 7.7
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 115 bits (276), Expect = 4e-27
Identities = 60/85 (70%), Positives = 67/85 (78%), Gaps = 2/85 (2%)
Frame = +1
Query: 220 NGAPQTKVC-QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFD-HTT 393
N AP+ V KLVLLG+SAVGKSSLVLRFVK QF +Y+ESTIGA FLT + D +T+
Sbjct: 4 NTAPKNVVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTS 63
Query: 394 VKFEIWDTAGQERYHSLAPMYYRGA 468
VK EIWDTAGQERY SLAPMYYR A
Sbjct: 64 VKLEIWDTAGQERYKSLAPMYYRNA 88
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 85.4 bits (202), Expect = 4e-18
Identities = 38/73 (52%), Positives = 52/73 (71%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQE 429
FK VL+G+S VGKS+L++RF + +F+ +STIG F T I D+ +K +IWDTAGQE
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 430 RYHSLAPMYYRGA 468
RY ++ YYRGA
Sbjct: 71 RYRAITSAYYRGA 83
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQ 426
+FKLV LGE +VGK+SL+ RF+ QF ++TIG FL+ + + TV+ ++WDTAGQ
Sbjct: 11 KFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 70
Query: 427 ERYHSLAPMYYR 462
ER+ SL P Y R
Sbjct: 71 ERFRSLIPSYIR 82
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 78.6 bits (185), Expect = 4e-16
Identities = 37/73 (50%), Positives = 47/73 (64%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQE 429
FKL+L+G+S VGKS L+LRF + E STIG F + TVK +IWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 430 RYHSLAPMYYRGA 468
R+ ++ YYRGA
Sbjct: 69 RFRTITSSYYRGA 81
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 77.0 bits (181), Expect = 1e-15
Identities = 34/72 (47%), Positives = 51/72 (70%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQER 432
K+++LGES VGK+S++ ++V +F + ++TIGA FLT + D V ++WDTAGQER
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 433 YHSLAPMYYRGA 468
+ SL +YRGA
Sbjct: 70 FQSLGVAFYRGA 81
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 74.9 bits (176), Expect = 5e-15
Identities = 35/72 (48%), Positives = 49/72 (68%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQER 432
K+V+LG+S VGK+ L+ +FV +F ++TIGA FLT + D V ++WDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 433 YHSLAPMYYRGA 468
+ SL +YRGA
Sbjct: 70 FQSLGMAFYRGA 81
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 73.3 bits (172), Expect = 2e-14
Identities = 35/72 (48%), Positives = 46/72 (63%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQER 432
KL+L+G+S VGKS L+LRF + F +TIG F I D +K +IWDTAGQER
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 433 YHSLAPMYYRGA 468
+ ++ YYRGA
Sbjct: 71 FRTITTAYYRGA 82
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 66.1 bits (154), Expect = 3e-12
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRF----DHTTVKFEIWDTA 420
K+VL G S GKS L+ RFVK Q+ + T+G F + I +K +IWDTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 421 GQERYHSLAPMYYRGA 468
GQE++ S+A YYRGA
Sbjct: 71 GQEKFRSVARNYYRGA 86
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 60.5 bits (140), Expect = 1e-10
Identities = 24/67 (35%), Positives = 42/67 (62%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQER 432
K+ ++G+S++GK+SL++ +V+G F E T+G F+ I +T + F IWD GQ
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 433 YHSLAPM 453
+ ++ PM
Sbjct: 72 FVNMLPM 78
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 56.0 bits (129), Expect = 3e-09
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQER 432
K+V+LG+ A GK+SL+ F KG F + E TI ++ I D +++ +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHD-IFVDGNSIELSLWDTAGQEE 73
Query: 433 YHSLAPMYY 459
Y L + Y
Sbjct: 74 YDQLRSLSY 82
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 55.2 bits (127), Expect = 5e-09
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +1
Query: 232 QTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIW 411
Q++ + KLV++G+ A GK+SL+ F G F T+ +++ R D +V+ +W
Sbjct: 3 QSQPIRRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDC-RVDGKSVQLALW 61
Query: 412 DTAGQERYHSLAPMYYRGA 468
DTAGQE Y L PM Y A
Sbjct: 62 DTAGQEEYERLRPMSYAKA 80
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 54.0 bits (124), Expect = 1e-08
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQER 432
KLV++G+ A GK+ L++ F KG F E T+ ++ + D V+ +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHVELALWDTAGQED 66
Query: 433 YHSLAPMYY 459
Y L P+ Y
Sbjct: 67 YDRLRPLSY 75
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 53.6 bits (123), Expect = 1e-08
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQER 432
KLV++G+ A GK+ L++ F KG F E T+ ++ + D ++ +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHIELALWDTAGQED 66
Query: 433 YHSLAPMYY 459
Y L P+ Y
Sbjct: 67 YDRLRPLSY 75
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 52.8 bits (121), Expect = 3e-08
Identities = 28/77 (36%), Positives = 41/77 (53%)
Frame = +1
Query: 229 PQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEI 408
PQ V FKLVL+G+ GK++ V R + G+F + +T+G + + F +
Sbjct: 4 PQN-VPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNV 62
Query: 409 WDTAGQERYHSLAPMYY 459
WDTAGQE+ L YY
Sbjct: 63 WDTAGQEKLGGLRDGYY 79
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 48.8 bits (111), Expect = 4e-07
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTV-KFEIWDTAGQE 429
KLV++G+ GK+ L++ F G F E T+ ++T ++ V + +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 430 RYHSLAPMYY 459
Y L P+ Y
Sbjct: 76 EYDRLRPLSY 85
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 46.4 bits (105), Expect = 2e-06
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +1
Query: 235 TKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWD 414
T + ++KLV++G+ VGKS+L ++ ++ F + + TI + D ++ D
Sbjct: 4 TYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSY-RKKCEIDGEGALLDVLD 62
Query: 415 TAGQERYHSLAPMYYR 462
TAGQE Y ++ Y R
Sbjct: 63 TAGQEEYSAMREQYMR 78
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 41.9 bits (94), Expect = 5e-05
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQER 432
++ +LG +VGKSSL +++V+ F E TI F + I++ EI DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTF-SKNIKYKGQEFATEIIDTAGQDE 66
Query: 433 YHSL 444
Y L
Sbjct: 67 YSIL 70
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 38.7 bits (86), Expect = 4e-04
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQF-HEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQE 429
K V++G+ AVGK+ L++ + +F +Y + +T I + T+ ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLG--LFDTAGQE 62
Query: 430 RYHSLAPMYY 459
Y L P+ Y
Sbjct: 63 DYDRLRPLSY 72
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 33.1 bits (72), Expect = 0.022
Identities = 18/73 (24%), Positives = 37/73 (50%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQ 426
+ ++++LG A GK++++ + Q T+G F + + + +KF +WD GQ
Sbjct: 21 EMRILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVG--FNVETVTYKN--IKFNVWDVGGQ 75
Query: 427 ERYHSLAPMYYRG 465
++ L Y+ G
Sbjct: 76 DKIRPLWRHYFTG 88
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 29.9 bits (64), Expect = 0.20
Identities = 16/72 (22%), Positives = 37/72 (51%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQ 426
+ +++++G A GK++++ + G+ TIG F + ++ + F +WD GQ
Sbjct: 17 EMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIG--FNVETV--EYRNISFTVWDVGGQ 71
Query: 427 ERYHSLAPMYYR 462
++ L Y++
Sbjct: 72 DKIRPLWRHYFQ 83
>SPBC1271.12 |kes1||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 388
Score = 29.1 bits (62), Expect = 0.36
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 162 SYNDREGYGDKQDRSRTEAQWRSTDKSLPVQAG 260
S + R+G GDK+ RS T++ W S KS+ +G
Sbjct: 7 SDDSRDGEGDKRLRSTTKSTWLSFLKSIATFSG 39
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 27.1 bits (57), Expect = 1.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 317 PLTNRSTSEDLPTADSPNNTSLN 249
P N TS+DL DSPN + +N
Sbjct: 376 PSENSDTSDDLTKVDSPNKSLVN 398
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 25.8 bits (54), Expect = 3.3
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKF------EIWD 414
K++L+G S GKSS+ V + +GA I +H+ V+F +WD
Sbjct: 4 KVLLMGRSGSGKSSM-RSIVFSNYVAKDTRRLGA-----TIDIEHSHVRFLGNLVLNLWD 57
Query: 415 TAGQERY 435
GQE +
Sbjct: 58 CGGQEAF 64
>SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 255
Score = 25.4 bits (53), Expect = 4.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 286 KSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKF 402
K + +V ++E + S IG+ F+TPA+ F T + F
Sbjct: 128 KDEIFANWVDMDYYE-KLSYIGSAFITPALYFTLTLILF 165
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 25.4 bits (53), Expect = 4.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 329 SWNCPLTNRSTSEDLPTADS 270
S N P N T EDLPT D+
Sbjct: 263 SENVPKPNAETQEDLPTIDA 282
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 25.4 bits (53), Expect = 4.4
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +1
Query: 256 LVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTT----VKFEIWDTAG 423
+V+ GE+ GKS+ V++F+ + E + V T R + V FE T G
Sbjct: 596 VVISGETGSGKSTQVVQFILDHYLSSGEKDLQTVVCTQPRRISAISLAERVAFERDTTVG 655
Query: 424 QERYHSL 444
+E +S+
Sbjct: 656 KEVGYSV 662
>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 25.0 bits (52), Expect = 5.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 284 PTADSPNNTSLNWQTFVCGAPLGLCAAPVLFVAIS 180
P+ +P +NW V GAP+ A +++ AIS
Sbjct: 486 PSVKNPTPAEMNWTCLVFGAPM---LAVLIWYAIS 517
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 25.0 bits (52), Expect = 5.8
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -2
Query: 329 SWNCPLT-NRSTSEDLPTADSPNNTSL 252
+W CPLT N +T + L ++P++ SL
Sbjct: 120 NWKCPLTINTTTFKFLTRKNNPSSMSL 146
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 25.0 bits (52), Expect = 5.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 219 GPLCGSGPVCRHIPPCHCSSVLNFLLGR 136
G + SG HI P + S VLN L+GR
Sbjct: 150 GVVVDSGDGVTHIVPVYESVVLNHLVGR 177
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.0 bits (52), Expect = 5.8
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -2
Query: 413 SQISNLTVVWSNRMAGVRNTAPMVLSWYSWNCPLTNRSTSEDLPTADSPNNTSLN 249
S +S+ T + +R A +N L++ S P ++ STS S N TS+N
Sbjct: 225 SSVSS-TYLTQDREASSKNCLSKALAFSSIEPPASSASTSPRNTPTPSNNGTSIN 278
>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
3|||Manual
Length = 963
Score = 25.0 bits (52), Expect = 5.8
Identities = 11/39 (28%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -2
Query: 404 SNLTVVWSNRMAGVRNTAPMVLSWY-SWNCPLTNRSTSE 291
SN+ ++ +++ GV++ P++L + +W L++R+ SE
Sbjct: 730 SNMVIILVSKITGVQSP-PLILKKHDNWKVSLSSRAPSE 767
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 24.6 bits (51), Expect = 7.7
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 157 NGATMTGRDMATNRTGAAQRPNGAPQTKVCQFKLVLLGESAVGKSSL 297
NG + +G N Q N + + K +K++LLG S GKS++
Sbjct: 5 NGLSESGESKKLNSKIEKQIENASKKDKKI-YKVLLLGASDSGKSTI 50
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 24.6 bits (51), Expect = 7.7
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +3
Query: 12 VRGHFGFLF*IFQFYIYD**LYLFKCVINDNFGVTATS*RSVAQVKSSERSYNDREGYGD 191
+R + L + + ++YD L ++ + +FG + T + + V+ RSY R + D
Sbjct: 2206 LRSNTESLMAVLEAFVYDP-LINWRLMTKSSFGASTTLRPTSSSVEEKGRSYTHRARHAD 2264
Query: 192 KQDRSRT 212
S T
Sbjct: 2265 YAALSET 2271
>SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 978
Score = 24.6 bits (51), Expect = 7.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 234 LWSAIGPLCGSGPVCRHIPPCHCSSVLNFLLGR 136
L+ +G L SG + +C S++N L+G+
Sbjct: 617 LFETVGVLISSGNLTPEEQALYCDSLINALIGK 649
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,070,971
Number of Sequences: 5004
Number of extensions: 42283
Number of successful extensions: 152
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 180421690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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