Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0634
(471 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 169 1e-42
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 83 9e-17
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 80 1e-15
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 76 1e-14
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 4e-14
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 75 4e-14
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 7e-14
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 73 2e-13
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 3e-12
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 67 6e-12
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 1e-11
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 1e-11
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 64 6e-11
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 7e-11
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 63 1e-10
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 63 1e-10
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 6e-09
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 55 3e-08
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-08
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 54 6e-08
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 54 6e-08
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 50 1e-06
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 50 1e-06
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 49 2e-06
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 49 2e-06
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 48 4e-06
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 47 7e-06
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 46 1e-05
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 46 2e-05
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 46 2e-05
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 45 3e-05
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 44 5e-05
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 42 3e-04
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 40 0.001
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 39 0.002
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 39 0.002
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 38 0.003
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 38 0.003
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 38 0.004
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 38 0.006
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 37 0.007
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 37 0.007
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 37 0.007
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.013
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 36 0.022
SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014) 35 0.030
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.068
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 34 0.068
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 33 0.090
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 33 0.090
SB_31418| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.090
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 32 0.28
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.36
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 31 0.36
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.48
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 31 0.64
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 31 0.64
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 31 0.64
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 31 0.64
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.84
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.84
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 30 1.1
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 30 1.1
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 30 1.1
SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2) 30 1.1
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_56941| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_31919| Best HMM Match : ArgK (HMM E-Value=7.6e-15) 29 1.9
SB_44360| Best HMM Match : Ion_trans (HMM E-Value=1.99993e-41) 29 1.9
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 29 1.9
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 29 1.9
SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2) 29 2.6
SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06) 28 3.4
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 28 3.4
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 28 4.5
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 28 4.5
SB_32192| Best HMM Match : Guanylin (HMM E-Value=4.9) 28 4.5
SB_52469| Best HMM Match : MSSP (HMM E-Value=0.54) 27 5.9
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_20852| Best HMM Match : PC_rep (HMM E-Value=1.8e-13) 27 5.9
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 27 5.9
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 27 5.9
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_31930| Best HMM Match : RVT_1 (HMM E-Value=1.3e-33) 27 5.9
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_56373| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_52511| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 27 7.8
SB_1242| Best HMM Match : DUF590 (HMM E-Value=4.2e-05) 27 7.8
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 169 bits (410), Expect = 1e-42
Identities = 81/95 (85%), Positives = 83/95 (87%)
Frame = +1
Query: 184 MATNRTGAAQRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFL 363
MA NR G AQRPNGA K+CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGA FL
Sbjct: 1 MAANR-GGAQRPNGATMGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL 59
Query: 364 TPAIRFDHTTVKFEIWDTAGQERYHSLAPMYYRGA 468
T + D TTVKFEIWDTAGQERYHSLAPMYYRGA
Sbjct: 60 TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGA 94
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 83.4 bits (197), Expect = 9e-17
Identities = 36/73 (49%), Positives = 52/73 (71%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQE 429
+K+VL+G+S VGKSSL+ RF + +F +STIG F T +I+ + +K ++WDTAGQE
Sbjct: 13 YKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQE 72
Query: 430 RYHSLAPMYYRGA 468
RY ++ YYRGA
Sbjct: 73 RYRAITSAYYRGA 85
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 79.8 bits (188), Expect = 1e-15
Identities = 38/73 (52%), Positives = 47/73 (64%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQE 429
FKL+L+G+S VGKSSL+LRF F STIG F + D T+K +IWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQE 68
Query: 430 RYHSLAPMYYRGA 468
R+ +L YYR A
Sbjct: 69 RFRTLTTAYYRSA 81
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 76.2 bits (179), Expect = 1e-14
Identities = 34/73 (46%), Positives = 47/73 (64%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQE 429
FK+VL G++AVGKSS +LR + +FH ST+G F + D T ++WDTAGQE
Sbjct: 443 FKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQE 502
Query: 430 RYHSLAPMYYRGA 468
R+ S+A Y+R A
Sbjct: 503 RFRSIAKSYFRKA 515
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 74.5 bits (175), Expect = 4e-14
Identities = 35/72 (48%), Positives = 45/72 (62%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQER 432
K++++GES VGKSSL+LRF F +TIG F + + K IWDTAGQER
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQER 69
Query: 433 YHSLAPMYYRGA 468
+ +L P YYRGA
Sbjct: 70 FRTLTPSYYRGA 81
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 74.5 bits (175), Expect = 4e-14
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRF-DHTTVKFEIWDTAG 423
QF+++L+G+S VGKSSL+ +F +GQF E + T+G F + +K +IWDTAG
Sbjct: 13 QFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAG 72
Query: 424 QERYHSLAPMYYR 462
QER+ S+ YYR
Sbjct: 73 QERFRSITYSYYR 85
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 73.7 bits (173), Expect = 7e-14
Identities = 34/73 (46%), Positives = 45/73 (61%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQE 429
FK++L+G++ VGK+ LV +F KG F Q TIG F + D VK +IWDTAGQE
Sbjct: 8 FKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQE 67
Query: 430 RYHSLAPMYYRGA 468
R+ S+ YY A
Sbjct: 68 RFRSITQSYYHNA 80
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/83 (42%), Positives = 48/83 (57%)
Frame = +1
Query: 220 NGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVK 399
+ A Q FKL+++G SAVGK+S + R+ F ST+G F + + VK
Sbjct: 12 DAADQNFDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVK 71
Query: 400 FEIWDTAGQERYHSLAPMYYRGA 468
+IWDTAGQERY ++ YYRGA
Sbjct: 72 LQIWDTAGQERYRTITTAYYRGA 94
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 68.9 bits (161), Expect = 2e-12
Identities = 33/70 (47%), Positives = 42/70 (60%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQER 432
K+V LG+ VGKSSL RF+ F E + TIG F+T + D V+ +IWDTAGQER
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 433 YHSLAPMYYR 462
+ L Y R
Sbjct: 225 FRCLIHSYIR 234
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 68.1 bits (159), Expect = 3e-12
Identities = 30/73 (41%), Positives = 44/73 (60%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQE 429
FK++++G+ VGK+SL+ RF KG F + ST+G T + VK + WDTAGQE
Sbjct: 12 FKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQE 71
Query: 430 RYHSLAPMYYRGA 468
++ + YYR A
Sbjct: 72 KFRGITQSYYRNA 84
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 67.3 bits (157), Expect = 6e-12
Identities = 31/73 (42%), Positives = 47/73 (64%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQE 429
FK+++LG+ VGKSSL+ RF +F+ +TIG F D VK ++WDTAG+E
Sbjct: 11 FKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEE 70
Query: 430 RYHSLAPMYYRGA 468
+Y +L+ ++RGA
Sbjct: 71 KYRALSRSFFRGA 83
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 66.5 bits (155), Expect = 1e-11
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQE 429
FK++++G+S VGK+ L R G+F E E+TIG F ++ + VK ++WDTAGQE
Sbjct: 47 FKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQE 106
Query: 430 RYH-SLAPMYYR 462
R+ S+ YYR
Sbjct: 107 RFRKSMVCHYYR 118
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +1
Query: 262 LLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQERYHS 441
L + VGKSSL+ RFV G+F TIG FL ++ D + +IWDTAGQER+ S
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKS 275
Query: 442 LAPMYYRGA 468
L +YRG+
Sbjct: 276 LRTPFYRGS 284
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 64.1 bits (149), Expect = 6e-11
Identities = 30/73 (41%), Positives = 43/73 (58%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQE 429
FK+VLLGE+ VGK+SL R + F + +TIG + ++ V +WDTAG E
Sbjct: 12 FKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVE 71
Query: 430 RYHSLAPMYYRGA 468
R+ ++ YYRGA
Sbjct: 72 RFRTVTKNYYRGA 84
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 63.7 bits (148), Expect = 7e-11
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRF-DHTTVKFEIWDTAGQ 426
FK++++G+ GK S V R+V +H + TIG F I++ +TT++ +IW AGQ
Sbjct: 19 FKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAGQ 78
Query: 427 ERYHSLAPMYYRGA 468
ER+ S+ +YY+GA
Sbjct: 79 ERFSSMTRVYYKGA 92
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDT 417
FK+VL+G+S VGKS+L+ RF + +F+ +STIG F T +I+ D T+K +IWDT
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 63.3 bits (147), Expect = 1e-10
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQE 429
FK+V +G+S VGKSS + RF Q+ +TIG F + + + ++WDTAGQE
Sbjct: 897 FKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQE 956
Query: 430 RYHSLAPMYYRGA 468
R+ S+ Y+R A
Sbjct: 957 RFRSITKQYFRKA 969
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 62.5 bits (145), Expect = 2e-10
Identities = 40/94 (42%), Positives = 50/94 (53%), Gaps = 21/94 (22%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRF------------------VKGQFHEYQES---TIGAVFLT 366
FKL+L+G+S VGKS L+LRF + Q Y ES TIG F
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFKI 68
Query: 367 PAIRFDHTTVKFEIWDTAGQERYHSLAPMYYRGA 468
I D T+K +IWDTAGQER+ ++ YYRGA
Sbjct: 69 RTIELDGKTIKLQIWDTAGQERFRTITSSYYRGA 102
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 57.2 bits (132), Expect = 6e-09
Identities = 25/57 (43%), Positives = 38/57 (66%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTA 420
FK+VL+G+S VGKS+L+ R+ K +FH ++TIG + + TV+ +IWDTA
Sbjct: 19 FKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 54.8 bits (126), Expect = 3e-08
Identities = 29/72 (40%), Positives = 43/72 (59%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQ 426
++K+V+LG VGKS+L ++FV GQF E + TI F I D+ EI DTAG
Sbjct: 3 EYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-EDFYRKEIEVDNNPSILEILDTAGT 61
Query: 427 ERYHSLAPMYYR 462
E++ S+ +Y +
Sbjct: 62 EQFASMRDLYIK 73
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 54.4 bits (125), Expect = 5e-08
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQER 432
KLV++G+ A GK+ L++ F K QF E T+ ++ I D V+ +WDTAGQE
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 5989
Query: 433 YHSLAPMYY 459
Y L P+ Y
Sbjct: 5990 YDRLRPLSY 5998
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 54.0 bits (124), Expect = 6e-08
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = +1
Query: 214 RPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTT 393
RPNG Q ++ ++L+G+S GK++L+ +V+ QF+E E+T+ L+ A+ D
Sbjct: 226 RPNG--QIRI---PVILVGDSECGKTALLNAYVRNQFNEKYEATV-FNSLSTAVEVDGER 279
Query: 394 VKFEIWDTAGQERYHSLAPMYY 459
++ +WDT+G E Y + P+ Y
Sbjct: 280 IELTLWDTSGHEDYDHVRPLSY 301
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 54.0 bits (124), Expect = 6e-08
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFH-EYQESTIGAV-FLTPAIRFDHTTVKFEIWDTA 420
+FK +++G S VGKS LV + F ++ ST+ +D+ +K I DTA
Sbjct: 350 EFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTA 409
Query: 421 GQERYHSLAPMYYRG 465
GQERY S+ P Y+RG
Sbjct: 410 GQERYFSILPAYFRG 424
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 265 LGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRF-DHTTVKFEIWDTAGQERYHS 441
+G+ GK++ V R + G+F + +T+G V + P I F +KF +WDTAGQE++
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLG-VEVHPLIFFTSRGPIKFNVWDTAGQEKFGG 96
Query: 442 LAPMYY 459
L YY
Sbjct: 97 LRDGYY 102
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQER 432
K+ ++G +VGKSSL ++FV+GQF + + TI F T I++ E+ DTAGQ+
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKNIKYKGQEFFLELVDTAGQDE 66
Query: 433 YHSLAPMYY 459
Y S+ P Y
Sbjct: 67 Y-SIFPQSY 74
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQ 426
Q+KLV++G VGKS+L ++F++ F + TI + + D +I DTAGQ
Sbjct: 11 QYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCV-IDERVAHLDILDTAGQ 69
Query: 427 ERYHSLAPMYYR 462
E + ++ Y R
Sbjct: 70 EEFSAMREQYMR 81
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 340 STIGAVFLTPAIRFDHTTVKFEIWDTAGQERYHSLAPMYYRG 465
+TIG F I D VK +IWDTAGQER+ ++ YYRG
Sbjct: 8 TTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRG 49
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +1
Query: 343 TIGAVFLTPAIRFDHTTVKFEIWDTAGQERYHSLAPMYYRGA 468
TIG F + + +VK +IWDTAGQER+ S+ YYRGA
Sbjct: 127 TIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGA 168
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 47.2 bits (107), Expect = 7e-06
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 397 KFEIWDTAGQERYHSLAPMYYRGA 468
KF IWDTAGQER+ SLAP+YYR A
Sbjct: 10 KFNIWDTAGQERFKSLAPLYYRDA 33
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQE 429
F++V+LG VGK+SLV RF+ G F E T+G ++ EI DTAG
Sbjct: 108 FRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMDTAGSY 167
Query: 430 RYHSLAPMYYRGA 468
+ ++ + + A
Sbjct: 168 PFPAMKKLTIQNA 180
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Frame = +1
Query: 232 QTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRF-------DHT 390
Q K K + LG+S VGK+SL+ ++ F+ TIG F + + +
Sbjct: 101 QGKEFLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERS 160
Query: 391 T----VKFEIWDTAGQERYHSLAPMYYRGA 468
T + ++WDTAGQER+ SL ++R A
Sbjct: 161 TRGQRIHLQLWDTAGQERFRSLTTAFFRDA 190
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQEST--IGAVFLTPAIRFDHTTVKFEIWDTAG 423
+K+ L G+ VGK+S+ R +F E ++S I F+ P + + +K +WDT G
Sbjct: 9 YKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFI-PLVCICNKKLKIHLWDTLG 67
Query: 424 QERYHSLAPMYY 459
E Y SL +Y
Sbjct: 68 MEEYESLTRNHY 79
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 45.2 bits (102), Expect = 3e-05
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +1
Query: 394 VKFEIWDTAGQERYHSLAPMYYRGA 468
+K +IWDTAGQER+H++ YYRGA
Sbjct: 5 IKLQIWDTAGQERFHTITTAYYRGA 29
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 44.4 bits (100), Expect = 5e-05
Identities = 23/71 (32%), Positives = 43/71 (60%)
Frame = +1
Query: 232 QTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIW 411
+T + +F +V G S+VGK+SL+LRF+ F++ TI F+ + F++ T + +I
Sbjct: 23 ETSLRRFTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIEDFFI-KHVFFNNETYELQII 81
Query: 412 DTAGQERYHSL 444
DT+G + ++
Sbjct: 82 DTSGTYEFPAM 92
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 41.5 bits (93), Expect = 3e-04
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQF-HEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAG 423
Q K V++G+ VGK+SL++ ++ F + Y + +T + + E DTAG
Sbjct: 18 QLKCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHVT--VEVNKKLCMIEFCDTAG 75
Query: 424 QERYHSLAPMYYRGA 468
QE + +L P+ Y A
Sbjct: 76 QEDFDALRPLCYSSA 90
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 41.1 bits (92), Expect = 5e-04
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQER 432
KLV++G+ VGKS+ ++ F T+ + + I D +WDTAGQE
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNY-SSNIMLDGKAYNVGLWDTAGQED 65
Query: 433 YHSLAPMYY 459
Y L P+ Y
Sbjct: 66 YDRLRPLSY 74
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/73 (32%), Positives = 36/73 (49%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQ 426
+ +L L+G GK++ V GQF E T+G F + + T+K +WD GQ
Sbjct: 20 EMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVSKGNVTIK--VWDIGGQ 75
Query: 427 ERYHSLAPMYYRG 465
R+ S+ Y RG
Sbjct: 76 PRFRSMWERYCRG 88
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQF-HEYQESTIGAVFLTPAIRFDHTTVKFEIWDTA 420
+ LVLLG++ VGKS+L++RF G+F HEY + T+ + A D I DTA
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEY-DPTLEMTYDVSA-TIDEDPATLHITDTA 183
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQF-HEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQE 429
K V++G+ AVGK+ L++ + +F EY + +T I + T+ ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLG--LFDTAGQE 62
Query: 430 RYHSLAPMYY 459
Y L P+ Y
Sbjct: 63 DYDRLRPLSY 72
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQ 426
+++ LLG+ VGK++L++RF+ +F + TI + +I D TV EI DTA +
Sbjct: 6 YRIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKY-RKSINIDDVTVTLEILDTASR 63
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 348
++K+V+LG VGKS+L ++FV GQF E + TI
Sbjct: 3 EYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI 36
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQER 432
++V+LG+ VGKS+L +RF+ +F + T+ + ++ D+ V +I DTAG+ R
Sbjct: 18 RVVVLGKDGVGKSALTVRFLTRRFIGEYDQTLESTH-RHILQIDNEDVSLDISDTAGEVR 76
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 394 VKFEIWDTAGQERYHSLAPMYYR 462
VK +IWDTAGQER+ ++ YYR
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYR 117
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1
Query: 406 IWDTAGQERYHSLAPMYYRGA 468
IWDTAGQER+ SL +YRGA
Sbjct: 1 IWDTAGQERFQSLGVAFYRGA 21
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 37.5 bits (83), Expect = 0.006
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQ 426
K+V++GE VGKS+L +RF+ +F + T+ + + A V E+ DTAG+
Sbjct: 863 KVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQDA-EVAGEVVAIELTDTAGE 919
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 37.1 bits (82), Expect = 0.007
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 351
++ +V+LG + VGK++LV+RFV G+F + T+G
Sbjct: 324 KYSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 37.1 bits (82), Expect = 0.007
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKF--EIWDTA 420
+ K+VL G++ VGK+S ++ + + E T A F + + + KF ++WDT
Sbjct: 6 KLKVVLTGDNNVGKTSFLINLTQNEL----EGTPTA-FANYELGLEVGSQKFLLDLWDTE 60
Query: 421 GQERYHSLAPMYYRGA 468
G Y L P+ Y+G+
Sbjct: 61 GTTEYDRLRPLTYQGS 76
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 37.1 bits (82), Expect = 0.007
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQE 429
F +V+LG GK+S++ R +F EY + F IR ++F++WD G+E
Sbjct: 22 FHVVMLGLDKSGKTSILYR---NKFREYVNTVPTTAFNVETIR-PFKGIRFKVWDIGGRE 77
Query: 430 RYHSLAPMYYR 462
+ L Y R
Sbjct: 78 QNRPLWKAYAR 88
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 36.3 bits (80), Expect = 0.013
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFD--HTTVKFEIWDTAGQ 426
KL+L+G A GK++L+ R + + +T G ++ D H F+IWD GQ
Sbjct: 553 KLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFIFKIWDFGGQ 612
Query: 427 ERYHS 441
E Y++
Sbjct: 613 EDYYA 617
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 35.5 bits (78), Expect = 0.022
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQF--HEYQESTIGAVFLTPAIRFDHTTVKFEIWDTA 420
+ KLVLLGES GK+S V+ + + T+G V + D V ++ D A
Sbjct: 260 RIKLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDGLEV--QVVDCA 317
Query: 421 GQERYHSLAPMY 456
GQ RY P +
Sbjct: 318 GQRRYQLTHPFF 329
>SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014)
Length = 399
Score = 35.1 bits (77), Expect = 0.030
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2
Query: 347 MVLSWYSWNCPLTNRSTSEDLPTADSPNNTSL 252
+V S++S NCP+TN + D PT P+ T+L
Sbjct: 4 IVGSYFSTNCPVTNCKVNADFPTPPDPSTTTL 35
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 33.9 bits (74), Expect = 0.068
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 351
FK++++G++ VGK+S V R+V G + TIG
Sbjct: 23 FKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 33.9 bits (74), Expect = 0.068
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQE 429
F+L ++G VGKSS+ +R++K +F E I + E+ DTAGQE
Sbjct: 2599 FRLCVVGSGGVGKSSVTIRYLKNEFTE--------------IDYCGKLYDIEVVDTAGQE 2644
Query: 430 RYHS 441
Y S
Sbjct: 2645 EYTS 2648
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 33.5 bits (73), Expect = 0.090
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFL 363
FKL+L+G+S VGK+ ++ RF F+ STI V L
Sbjct: 10 FKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIENVLL 47
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 33.5 bits (73), Expect = 0.090
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 229 PQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 351
P V ++V+LG+ VGKS+L +R + +F +ST+G
Sbjct: 10 PNDNVRSLRVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLG 50
>SB_31418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 33.5 bits (73), Expect = 0.090
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 335 WYSWNCPLTN-RSTSEDLPTADSPNNTSLNWQTFVCGAPLGLCAAPVLFVA 186
W S+ C L R+ +ED P AD+ S Q+F C P+G C V+ VA
Sbjct: 36 WSSFTCVLEEVRNPTED-PVADNQELNSFVPQSFTCADPVGFCWWIVVKVA 85
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 31.9 bits (69), Expect = 0.28
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +1
Query: 331 YQESTIGAVFLTPAIRFDHT------TVKFEIWDTAGQERYHSLAPMYYR 462
YQ+ TIG F I + T TVK + WD A ER+ + +Y R
Sbjct: 81 YQKPTIGVDFYVHFIEWRETDKKKDSTVKLQFWDVAEHERFLKMTAVYCR 130
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 31.9 bits (69), Expect = 0.28
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 394 VKFEIWDTAGQERYHSLAPMYYR 462
++ +WDTAGQE + ++ YYR
Sbjct: 34 IRLMLWDTAGQEEFDAITKAYYR 56
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 31.5 bits (68), Expect = 0.36
Identities = 17/72 (23%), Positives = 38/72 (52%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQ 426
Q +++++G A GK++++ + G+ TIG F ++ + + + F +WD GQ
Sbjct: 17 QMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIG--FNVESVEYKN--ISFTVWDVGGQ 71
Query: 427 ERYHSLAPMYYR 462
++ L Y++
Sbjct: 72 DKIRPLWRHYFQ 83
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 31.5 bits (68), Expect = 0.36
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAG 423
+K+ +LG VGK+SL+ F +F E T+ F+ ++ D I DTAG
Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVDDYFI-HSVNMDGVYYSTCIVDTAG 69
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 31.1 bits (67), Expect = 0.48
Identities = 21/90 (23%), Positives = 38/90 (42%)
Frame = +1
Query: 187 ATNRTGAAQRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLT 366
AT R A + G+ V + ++++LG GKS + +G + +T F
Sbjct: 146 ATKRQEADEEWEGSAGNSVPEKRILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEGFNV 205
Query: 367 PAIRFDHTTVKFEIWDTAGQERYHSLAPMY 456
+ D + IW+ G E+Y + P +
Sbjct: 206 VCLTTDG--LNLNIWEIGGDEKYRAYWPNF 233
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 30.7 bits (66), Expect = 0.64
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 250 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 348
FK++++G+ VGK+SL+ R+V F + +T+
Sbjct: 672 FKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATV 704
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 30.7 bits (66), Expect = 0.64
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQ 426
Q ++V+LG A GK++++ + + STI + V IWD GQ
Sbjct: 19 QVRIVMLGLDAAGKTTILYKLKLKE----TVSTIPTIGFNVETLQPTKNVTLTIWDVGGQ 74
Query: 427 ERYHSLAPMYYRG 465
++ L Y++G
Sbjct: 75 DKIRPLWRHYFQG 87
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 30.7 bits (66), Expect = 0.64
Identities = 15/72 (20%), Positives = 37/72 (51%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQ 426
+ +L+++G A GK++++ + +TI + + ++ +KF +WD GQ
Sbjct: 90 ELRLLMVGLDAAGKTTILYHLKLDE----PVNTIPTIGFNVEV-VEYKNIKFTVWDIGGQ 144
Query: 427 ERYHSLAPMYYR 462
++ L +Y++
Sbjct: 145 DKIRLLWRLYFQ 156
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 30.7 bits (66), Expect = 0.64
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 348
++ + G + VGK+S+V RF G+F E E T+
Sbjct: 10 EIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTV 41
>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 30.3 bits (65), Expect = 0.84
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTA 420
++KL ++G++ GK+SL+ VK E +E+ I +T D + ++F +WD++
Sbjct: 61 RYKLSVVGDAESGKTSLLNALVKSDI-EVEETVIFEECVTDVTSGD-SNLEFMLWDSS 116
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 30.3 bits (65), Expect = 0.84
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFH-----EYQESTIGAVFLTPAIRFDHTTVKFEIW 411
Q+K+VL+G++ VGKS ++ R H Y+ +T G A H +
Sbjct: 13 QYKVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTGGHASYFTASNSCH----LYLL 68
Query: 412 DTAGQERYHSLAPMYYR 462
DT+G E Y L +Y +
Sbjct: 69 DTSGLEEYRELTKIYLK 85
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/72 (22%), Positives = 37/72 (51%)
Frame = +1
Query: 247 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDHTTVKFEIWDTAGQ 426
+ +++++G A GK++++ + G+ TIG F + + + + F +WD GQ
Sbjct: 17 EMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIG--FNVETVEYKN--ISFTVWDVGGQ 71
Query: 427 ERYHSLAPMYYR 462
++ L Y++
Sbjct: 72 DKIRPLWRHYFQ 83
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 29.9 bits (64), Expect = 1.1
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1
Query: 385 HTTVKFEIWDTAGQERYHSLAPMYYRG 465
+ + F +WD GQ++ +L +YY+G
Sbjct: 37 YKNISFTVWDIGGQDKIRALWRVYYQG 63
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 241 VCQFKLVLLGESAVGKSSLVLRFVKGQFH--EYQESTIGAVFLTPAIRFDHTT 393
V + K+++ G+S VGKS+LV F H + T+GA L + TT
Sbjct: 3 VLRAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNIPETT 55
>SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2)
Length = 2658
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 407 ISNLTVVWSNRMAGVRNTAPMVLSWYSWNCPL 312
I+ L + WSN +G + P WY + PL
Sbjct: 146 ITTLRLSWSNNASGTGQSLPFTAKWYMFRHPL 177
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 252 ELADFCLWSAI-GPLCGSGPVCRHIPPCHCSSVLNFLLGRQ 133
E+ DFC +++ GP C +G VC + P + + GR+
Sbjct: 4434 EIRDFCALASVNGPACFNGGVCTNTPTSYTCTCARGFHGRR 4474
>SB_56941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1034
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 160 GATMTGRDMATNRTGAAQRPNG--APQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEY 333
G ++ ++ ++ + +PN AP + + LLG AV SSL F F +
Sbjct: 840 GVSIVQLQSSSTKSSSTSQPNATMAPSANLATKQNALLGFGAVVMSSLCSGFAGVYFEKI 899
Query: 334 QESTIGAVFL 363
+ T G+V+L
Sbjct: 900 LKGTSGSVWL 909
>SB_31919| Best HMM Match : ArgK (HMM E-Value=7.6e-15)
Length = 415
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 256 LVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIR 378
L + G GKSSLV V+ ++ E TIG + + P+ R
Sbjct: 86 LGITGTGGAGKSSLVDELVRRFLIDFPEKTIGLISVDPSKR 126
>SB_44360| Best HMM Match : Ion_trans (HMM E-Value=1.99993e-41)
Length = 373
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 212 CAAPVLFVAISLPVIVAPF*TFYLGDRSS 126
C + ++F+A+ +P IV+ F FY R S
Sbjct: 282 CISGIIFIALPIPTIVSNFSQFYKDQRKS 310
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -1
Query: 252 ELADFCLWSAI-GPLCGSGPVCRHIPPCH-CSSVLNF 148
E+ DFC +++ GP C +G VC + P + C+ F
Sbjct: 2650 EIRDFCALASVNGPACFNGGVCTNTPTSYTCTCARGF 2686
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 199 TGAAQRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 348
T Q +G P FK+ +LG SAVGK+SL+ K F TI
Sbjct: 174 TSNIQMGSGLPPV---DFKMAILGGSAVGKTSLMRALFKKPFTNEHIPTI 220
>SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2)
Length = 87
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 220 NGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFH 327
+ A TKV +K+V G VGK+SL LR +F+
Sbjct: 18 SSANHTKVPLYKVVFAGFRGVGKTSLFLRIRDEKFY 53
>SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06)
Length = 101
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 193 NRTGAAQRPNGAPQTKV---CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFL 363
N G A PN + V +F L+++GES +GKS+L+ + ++ +
Sbjct: 3 NYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLIDSLFLTDLYSDRKILSAEERI 62
Query: 364 TPAIRFDHTTVKFE 405
++ + +TV+ E
Sbjct: 63 KKTVKIETSTVEIE 76
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 409 WDTAGQERYHSLAPMYYRGA 468
W+ AGQER+ ++ YYRGA
Sbjct: 374 WE-AGQERFRTITSSYYRGA 392
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 382 DHTTVKFEIWDTAGQERYHSLAPMYY 459
+H ++KF IWD G ++ L YY
Sbjct: 229 EHRSLKFTIWDVGGLQKLRPLWRHYY 254
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 412 DTAGQERYHSLAPMYYRGA 468
DTAG+E+Y L+ Y RGA
Sbjct: 278 DTAGEEKYAGLSSFYCRGA 296
>SB_32192| Best HMM Match : Guanylin (HMM E-Value=4.9)
Length = 160
Score = 27.9 bits (59), Expect = 4.5
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +3
Query: 186 GDKQDRSRTEAQWRSTDKSLPVQAGVVGR-VCGRQVLAGAPIRQGTVPRVPGEHHRGCVP 362
GD +S ++ +S D V GV+ C + G+P R+ V RV G RG +P
Sbjct: 83 GDLPSQSTNDSTNQSADAM--VSRGVMSDGECVSRGYVGSPARRNVVSRVSGPPARGALP 140
Query: 363 NPGHSIRPHHR 395
S H R
Sbjct: 141 PTPPSGGRHSR 151
>SB_52469| Best HMM Match : MSSP (HMM E-Value=0.54)
Length = 341
Score = 27.5 bits (58), Expect = 5.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 237 CLWSAIGPLCGSGPVCRHI 181
C ++GPL GPVC+H+
Sbjct: 11 CKHVSMGPLTTGGPVCKHV 29
Score = 27.5 bits (58), Expect = 5.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 237 CLWSAIGPLCGSGPVCRHI 181
C +GPL GPVC+HI
Sbjct: 289 CKHVGMGPLTTGGPVCKHI 307
Score = 27.5 bits (58), Expect = 5.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 237 CLWSAIGPLCGSGPVCRHI 181
C +GPL GPVC+HI
Sbjct: 304 CKHIGMGPLTTGGPVCKHI 322
Score = 27.1 bits (57), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 237 CLWSAIGPLCGSGPVCRHI 181
C +GPL GPVC+H+
Sbjct: 26 CKHVGMGPLTTGGPVCKHV 44
Score = 27.1 bits (57), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 237 CLWSAIGPLCGSGPVCRHI 181
C +GPL GPVC+H+
Sbjct: 71 CKHVGMGPLTTGGPVCKHV 89
Score = 27.1 bits (57), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 237 CLWSAIGPLCGSGPVCRHI 181
C +GPL GPVC+H+
Sbjct: 150 CKHVGMGPLTTGGPVCKHV 168
Score = 27.1 bits (57), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 237 CLWSAIGPLCGSGPVCRHI 181
C +GPL GPVC+H+
Sbjct: 214 CKHVGMGPLTTGGPVCKHV 232
Score = 27.1 bits (57), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 237 CLWSAIGPLCGSGPVCRHI 181
C +GPL GPVC+H+
Sbjct: 259 CKHVGMGPLTTGGPVCKHV 277
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 27.5 bits (58), Expect = 5.9
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +3
Query: 78 LFKCVINDNFGVTATS*RSVAQVKSSERSYNDREGYGDKQDRSRTEAQWRSTD 236
+FKCV+ ++FG+ + S + V+ E SY++ + DR+ + RS D
Sbjct: 4953 IFKCVLLNDFGIASCS--AEILVEEDEESYSESSA-DEATDRNARIERRRSRD 5002
>SB_20852| Best HMM Match : PC_rep (HMM E-Value=1.8e-13)
Length = 638
Score = 27.5 bits (58), Expect = 5.9
Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
Frame = +3
Query: 132 SVAQVKSSERSYNDREGYGDKQDRSRTEAQWRSTDKSLPVQAGV-VGRVCGRQVLAGAPI 308
+ + K +E+ E + + E + DK L + + V R+ R V P
Sbjct: 5 AATEQKKTEKESKKDEAKAKDEPKREEEVELSEEDKLLQEELTMLVERLKERNVSLHKPA 64
Query: 309 RQGTVPRVPGE-HHRGCVPNPGHSIRPHHR*IRDLGYSW-TGEVSQLSADVL 458
+ ++ VP P +RPH+ ++++ W GE + AD++
Sbjct: 65 LEALRSQIRASTSSMTSVPKPLKFLRPHYASMKEVYQGWPDGENKRFLADII 116
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 27.5 bits (58), Expect = 5.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 394 VKFEIWDTAGQERYHSLAPMYYRGA 468
+ F +WD GQ++ L Y++GA
Sbjct: 154 ITFSVWDIGGQDKIRRLWRHYFQGA 178
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAV 357
K++L+G+S VGK+ L+L F+ + Q T G++
Sbjct: 14 KVLLIGDSNVGKTKLLLTFLGQESIVQQMPTAGSL 48
>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 27.5 bits (58), Expect = 5.9
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHE 330
K+VLLG+ GK+SLV R++ +F++
Sbjct: 29 KVVLLGKEYSGKTSLVERYLHHRFND 54
>SB_31930| Best HMM Match : RVT_1 (HMM E-Value=1.3e-33)
Length = 405
Score = 27.5 bits (58), Expect = 5.9
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -2
Query: 341 LSWYSWNCPLTNRSTSEDLPTADSPNNTSLNWQTFVCGAPLGLCAAPVLFVAISLPV 171
L+W+ N LTNR+ + N SL+ Q +CG PLG P+L+ + P+
Sbjct: 252 LAWF--NSYLTNRTQFVKIG-----NGFSLS-QKMLCGVPLGSVLGPMLYSLYTAPL 300
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 27.5 bits (58), Expect = 5.9
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Frame = +1
Query: 253 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAVFLTPAIRFDH-----TTVKFEIWDT 417
++ ++G+S VGK+SLV + TIG + T E WD
Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWDI 67
Query: 418 AGQERYHSLAPMYYRG 465
G + + ++Y G
Sbjct: 68 GGSANHENSRSIFYNG 83
>SB_56373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 629
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 296 SEDLPTADSPNNTSLNWQTFVCGAPL 219
+E P +SP NT ++ TFV PL
Sbjct: 431 TESSPDGESPKNTDIDGHTFVIKEPL 456
>SB_52511| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 513
Score = 27.1 bits (57), Expect = 7.8
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 266 NNTSLNWQTFVCGAPLGLCAAPVLFV 189
N TS +W + G P G P LF+
Sbjct: 337 NGTSSDWSPVISGVPQGTMLGPTLFL 362
>SB_1242| Best HMM Match : DUF590 (HMM E-Value=4.2e-05)
Length = 195
Score = 27.1 bits (57), Expect = 7.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 344 VLSWYSWNCPLTNRSTSE 291
V++W WNC T R T+E
Sbjct: 117 VIAWDDWNCKTTARRTTE 134
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,298,884
Number of Sequences: 59808
Number of extensions: 368380
Number of successful extensions: 1215
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 982083920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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