Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0634
         (471 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   0.94 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   0.94 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   2.9  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   3.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   3.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   6.7  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 116 RDTEIIINYTLKQI*SLIVNVKLEN 42
           RDT ++ +  LKQI S   NV+L N
Sbjct: 448 RDTCLLASDALKQILSAAYNVELHN 472


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 116 RDTEIIINYTLKQI*SLIVNVKLEN 42
           RDT ++ +  LKQI S   NV+L N
Sbjct: 486 RDTCLLASDALKQILSAAYNVELHN 510


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +3

Query: 282 RQVLAGAPIRQGTVPRVPGEHHRGCVPNPGHSIRP 386
           +Q  +GAP  Q +  + P    RG  PNP     P
Sbjct: 14  QQPSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPP 48


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 338 SWYSWNCPLTNRSTSEDL 285
           S+YS + P  NRS  EDL
Sbjct: 21  SFYSASYPPQNRSQEEDL 38


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 147 KSSERSYNDREGYGDKQDRSRTEAQWRSTDKSLPV 251
           K S+   +     G K  R+ TEA W S +  + V
Sbjct: 131 KMSDEKISTLYALGAKIIRTPTEASWHSPEAHISV 165


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 470 GAPL*YIGAKL*YLSCPAVS 411
           GA +  +  K+ Y+SCP +S
Sbjct: 176 GACISILAIKVYYISCPEIS 195


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,036
Number of Sequences: 438
Number of extensions: 3260
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)