Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0633
         (597 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86P20 Cluster: RE18590p; n=8; Endopterygota|Rep: RE185...   190   2e-47
UniRef50_UPI0000DB6B1A Cluster: PREDICTED: similar to CG33227-PB...    42   0.008
UniRef50_Q9VVY7 Cluster: CG32206-PB, isoform B; n=8; Diptera|Rep...    41   0.019
UniRef50_UPI0000D57119 Cluster: PREDICTED: similar to CG32432-PA...    40   0.034
UniRef50_UPI00015B5696 Cluster: PREDICTED: similar to ENSANGP000...    40   0.044
UniRef50_UPI0000F214BD Cluster: PREDICTED: Ras suppressor protei...    37   0.31 
UniRef50_UPI0000D56DA7 Cluster: PREDICTED: similar to CG32206-PB...    36   0.55 
UniRef50_UPI0000D57214 Cluster: PREDICTED: similar to Suppressor...    36   0.96 
UniRef50_UPI0000DB75D4 Cluster: PREDICTED: similar to CG32432-PA...    34   2.9  
UniRef50_A7TUR1 Cluster: Putative thymidylate synthase; n=1; Str...    33   5.1  
UniRef50_A6Y2Z4 Cluster: Superfamily II helicase and inactivated...    33   5.1  
UniRef50_Q9VPA1 Cluster: CG32432-PA; n=3; Diptera|Rep: CG32432-P...    33   6.7  
UniRef50_UPI0000D56D66 Cluster: PREDICTED: similar to CG32432-PA...    32   8.9  
UniRef50_Q225R4 Cluster: Helicase, putative; n=1; Tetrahymena th...    32   8.9  

>UniRef50_Q86P20 Cluster: RE18590p; n=8; Endopterygota|Rep: RE18590p
           - Drosophila melanogaster (Fruit fly)
          Length = 987

 Score =  190 bits (464), Expect = 2e-47
 Identities = 79/110 (71%), Positives = 96/110 (87%)
 Frame = +3

Query: 9   PRIGTFCGMGKFPYSIIGTSQDLFVEFVSSPAGPLLNTGFHFNVGNWPGHVEARGSRVGT 188
           P IG FCG+GKFP+SIIGTSQ ++VEFV+SPAGPLLNTGFHFNVGNWPGHVE  G + G 
Sbjct: 356 PLIGKFCGLGKFPFSIIGTSQYMYVEFVTSPAGPLLNTGFHFNVGNWPGHVETAGIKHGV 415

Query: 189 CDWLLTAESLKKSGDTEGIFLSVAHWYPPHTSCTYLMQGFPGQVVRLYFP 338
           CDWLL+++SLK S  +EGIFLS+AHWYPP+TSC+Y ++G  G++VRLYFP
Sbjct: 416 CDWLLSSDSLKDSSASEGIFLSIAHWYPPNTSCSYHIKGHVGEIVRLYFP 465


>UniRef50_UPI0000DB6B1A Cluster: PREDICTED: similar to CG33227-PB;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG33227-PB - Apis mellifera
          Length = 610

 Score = 42.3 bits (95), Expect = 0.008
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
 Frame = +3

Query: 15  IGTFCGMGKFPYSIIGTSQDLFVEFVSSPAGPLLNTGFHFNVGNWP-GHVEARGSRVGTC 191
           I  FCG G+ P  I+   + + VEF +   G +++ GF  +      GH    G     C
Sbjct: 390 ISKFCGEGQVP-RILSRGRSIVVEFFAEKDGTVMHDGFQLSFQETEEGHALMTGVDQN-C 447

Query: 192 DWLLTAESLKKSGDTEGIFLSVAHWYPPHTSCTYLMQG 305
           +++      + S  T     S+  WYPP+T C+Y   G
Sbjct: 448 EFVY-----RSSERTRENIKSLQSWYPPNTLCSYKFVG 480


>UniRef50_Q9VVY7 Cluster: CG32206-PB, isoform B; n=8; Diptera|Rep:
           CG32206-PB, isoform B - Drosophila melanogaster (Fruit
           fly)
          Length = 1260

 Score = 41.1 bits (92), Expect = 0.019
 Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
 Frame = +3

Query: 9   PRIGTFCGMGKFPYSIIGTSQDLFVEFVSSP-AGPLL----NTGFHFNVGNWPGHVEARG 173
           P +  +CG    P  ++    ++ V F SSP + PL     N GF  +V       ++  
Sbjct: 359 PVLAKYCGGDWLP-RVVSRGPEMLVAFHSSPFSAPLQQGIPNRGFELDVDILFTDSDSFD 417

Query: 174 SRVGT---CDWLLTAES----LKKSGDTEGIFLSVAHWYPPHTSCTYLMQGFPGQVVRLY 332
              GT   C++ + A +    L       G  +S  H  PP+T+CTY   G+PG ++ L 
Sbjct: 418 FAQGTKNLCEFHINASNPDDVLFSRRGRMGRIVSPRHTLPPNTTCTYHFHGYPGDLIWLS 477

Query: 333 F 335
           F
Sbjct: 478 F 478


>UniRef50_UPI0000D57119 Cluster: PREDICTED: similar to CG32432-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG32432-PA - Tribolium castaneum
          Length = 1035

 Score = 40.3 bits (90), Expect = 0.034
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
 Frame = +3

Query: 3   QQPRIGTFCGMGKFPYSIIGTSQDLFVEFVSSPAGPLLNTGFHFNVGNWPGHVEARGSRV 182
           + P I  FCG G+     + +  +L VEF +SP G  L       +  +   VE +    
Sbjct: 333 RDPVILKFCGGGEAVPEAVSSGHELLVEFSTSPYGTFLYPAPAQALHGFQLEVEVKFVDQ 392

Query: 183 GTCDWLLTAESLKKS--GDTEGIFLSVAHWYPPHTSCTYLMQGFPGQV 320
            +  ++ T    + S  G  +G+  S  H  P +T+C Y +QG    V
Sbjct: 393 QSPTYVKTKRQCEFSLRGTNKGVLESPLHSLPANTTCLYHLQGIDTSV 440


>UniRef50_UPI00015B5696 Cluster: PREDICTED: similar to
           ENSANGP00000013486; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000013486 - Nasonia
           vitripennis
          Length = 1124

 Score = 39.9 bits (89), Expect = 0.044
 Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
 Frame = +3

Query: 6   QPRIGTFCGMGKFPYSIIGTSQDLFVEFVSSPAGPLLNTGFHFNVGNWPGHVEARGSRVG 185
           +P I  FCG G+    ++ + +DL V F +SP G  L+     ++  +   V+ +     
Sbjct: 421 EPVILKFCGGGEPLPEVVSSGKDLLVVFTTSPYGTFLHPSPPHSLHGFQLDVQVKFVDAN 480

Query: 186 TCDWLLTAE-SLKKSGDTEGIFLSVAHWYPPHTSCTYLMQG 305
           +  ++ +        G+T G+  S  H  P +++C Y ++G
Sbjct: 481 SSTYVKSKRCEFWLRGNTGGVLTSPRHSLPRNSTCLYHLRG 521


>UniRef50_UPI0000F214BD Cluster: PREDICTED: Ras suppressor protein 1;
            n=5; Clupeocephala|Rep: PREDICTED: Ras suppressor protein
            1 - Danio rerio
          Length = 3461

 Score = 37.1 bits (82), Expect = 0.31
 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
 Frame = +3

Query: 9    PRIGTFCGMGKFPYSIIGTSQDLFVEFVSSPAGPLLNTGFHFNVGNWPGHVEARGSRVGT 188
            P IG +CG+ + P  +  T + +F++F +  +  + N GF    G+    ++     + +
Sbjct: 710  PLIGRYCGV-EMPPMLESTQKSMFIQFKTDAS--VSNHGFTAEFGSAEQGLDPNRKLI-S 765

Query: 189  CDWLLTAESLKKSGDTEGIFLSVAH--WYPPHTSCTYLMQGFPGQVVRLYF 335
            C     A   +   +  G F S  H   YP   +CT+ +   PG ++RL F
Sbjct: 766  CHVFPFAGCGETLTEPTGSFTSPGHPTEYPHGANCTWYISVPPGHLIRLSF 816


>UniRef50_UPI0000D56DA7 Cluster: PREDICTED: similar to CG32206-PB,
           isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG32206-PB, isoform B - Tribolium castaneum
          Length = 900

 Score = 36.3 bits (80), Expect = 0.55
 Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 14/123 (11%)
 Frame = +3

Query: 9   PRIGTFCGMGKFPYSIIGTSQDLFVEFVSSPAGPLLNT--------GFHFNVGNWPGHVE 164
           P +  +CG    P  ++    ++ V F SSP    L++        GF  +V       +
Sbjct: 250 PVLAKYCGGDWLP-KVVSRGPEMLVAFHSSPFSIPLHSPPSHSPLRGFELDVDVIFADSD 308

Query: 165 ARG-SRVGTCDWLLTAES-----LKKSGDTEGIFLSVAHWYPPHTSCTYLMQGFPGQVVR 326
           +   SR   C++ + A S     +      +G  +S  H  PP+T+CTY  QG+P  +V 
Sbjct: 309 SLDYSRQSRCEFDVNATSPDSDEIWTGRGRKGRIVSPRHSLPPNTTCTYKFQGYPHDLVW 368

Query: 327 LYF 335
           + F
Sbjct: 369 ISF 371


>UniRef50_UPI0000D57214 Cluster: PREDICTED: similar to Suppressor of
           lurcher protein 1 precursor; n=2; Endopterygota|Rep:
           PREDICTED: similar to Suppressor of lurcher protein 1
           precursor - Tribolium castaneum
          Length = 434

 Score = 35.5 bits (78), Expect = 0.96
 Identities = 30/109 (27%), Positives = 49/109 (44%)
 Frame = +3

Query: 9   PRIGTFCGMGKFPYSIIGTSQDLFVEFVSSPAGPLLNTGFHFNVGNWPGHVEARGSRVGT 188
           P I   C  G     ++ T  DL +EFV++   P    GF  +    P    + GS   +
Sbjct: 79  PAIRVLCNEGT-ELEVLSTGSDLLIEFVANSDWP--GQGFKASFQFQPTEDNSIGS---S 132

Query: 189 CDWLLTAESLKKSGDTEGIFLSVAHWYPPHTSCTYLMQGFPGQVVRLYF 335
           CD ++ +++  K+G    +  S    YP  T+C Y  QG   + V++ F
Sbjct: 133 CDVVINSDT-NKNGTI--VSPSYPAPYPSRTTCRYEFQGRGKERVQIVF 178


>UniRef50_UPI0000DB75D4 Cluster: PREDICTED: similar to CG32432-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG32432-PA - Apis mellifera
          Length = 984

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +3

Query: 189 CDWLLTAESLKKSGDTEGIFLSVAHWYPPHTSCTYLMQGFPGQVVRLYF 335
           CD+ ++++       + GI  +  H  PP+T+C Y  QG P ++V L F
Sbjct: 358 CDFYISSDE-----SSSGILENPKHSLPPNTTCRYHFQGKPNEIVWLSF 401


>UniRef50_A7TUR1 Cluster: Putative thymidylate synthase; n=1;
           Streptomyces lividans|Rep: Putative thymidylate synthase
           - Streptomyces lividans
          Length = 308

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +2

Query: 233 HGRHIPVRCALVSSSYLMYLPDARIPWTGCEAVLSQV 343
           +  HI    AL S S    +PD R PWTG   +L QV
Sbjct: 204 YDEHIEQADALTSLSASEIMPDLRTPWTGFSGLLDQV 240


>UniRef50_A6Y2Z4 Cluster: Superfamily II helicase and inactivated
           derivative; n=3; Gammaproteobacteria|Rep: Superfamily II
           helicase and inactivated derivative - Vibrio cholerae
           RC385
          Length = 580

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +3

Query: 108 PLLNTGFHFNVGNW-PGHVEARGSRVGTCDWL-LTAESLKKSGDTEGIFLSVAHW 266
           P L  GF +N  NW   H   + S V  C WL + A +    GD  G  L   HW
Sbjct: 22  PTLPAGFAYNAQNWLVMHPAGQDSPVKICSWLQVAARTRDPQGDNYGYLL---HW 73


>UniRef50_Q9VPA1 Cluster: CG32432-PA; n=3; Diptera|Rep: CG32432-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 1307

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
 Frame = +3

Query: 3   QQPRIGTFCGMGKFPYSIIGTSQDLFVEFVSSPAGPLLNTGFH-FNVGNWPGHVEARGSR 179
           + P I  FCG G+   + + +  +L VEF +SP G    T      +  +   VE +   
Sbjct: 608 RDPIILKFCGGGQAVPAAVSSGPELLVEFSTSPFGTFTGTSSQVLPLYGFQLEVEVQFVD 667

Query: 180 VGTCDWLLTAESLK--KSGDTEGIFLSVAHWYPPHTSCTYLMQG 305
           + +  +    +  +    G   GI  S  H   P+++C Y +QG
Sbjct: 668 IQSPTYSKNKKPCEFWIRGAGRGILESPKHSLAPNSTCLYHLQG 711


>UniRef50_UPI0000D56D66 Cluster: PREDICTED: similar to CG32432-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG32432-PA - Tribolium castaneum
          Length = 930

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 231 DTEGIFLSVAHWYPPHTSCTYLMQGFPGQVVRLYF 335
           +T G+  S  H  PP+T+C Y  +G P +++ + F
Sbjct: 368 NTSGLLESPLHSLPPNTTCHYHFRGHPKEIIWISF 402


>UniRef50_Q225R4 Cluster: Helicase, putative; n=1; Tetrahymena
           thermophila SB210|Rep: Helicase, putative - Tetrahymena
           thermophila SB210
          Length = 132

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +1

Query: 439 TRISRCRYIESFYFTTELIVNTLVLRLNTMY 531
           T ISRC+ IE  YF+ + I+N + L L+  Y
Sbjct: 100 TSISRCKKIEEVYFSNQAILNKIQLFLHLKY 130


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,930,610
Number of Sequences: 1657284
Number of extensions: 12424021
Number of successful extensions: 27781
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 26998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27777
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)