Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0633
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    24   1.1  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.1  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   7.9  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   7.9  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   7.9  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 65  FSRSVRRIRQLTCRA 109
           F RS+RR RQ  C+A
Sbjct: 62  FKRSIRRNRQYVCKA 76


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 65  FSRSVRRIRQLTCRA 109
           F RS+RR RQ  C+A
Sbjct: 62  FKRSIRRNRQYVCKA 76


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
          5-like protein protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 59 DD*VRKFAHAAECTNP 12
          D  +RKF    EC NP
Sbjct: 4  DGFIRKFVLCPECENP 19


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +1

Query: 22  HSAAWANFLTQSSELLKICS*NSSAHLQGLC*ILVSILTSATGL 153
           H A W N +TQ   L ++ S     + + LC + + +  S   L
Sbjct: 43  HVAQWINLVTQQHGLPEVPSSRFLMNGKALCLMSLGMFLSRVPL 86


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +1

Query: 22  HSAAWANFLTQSSELLKICS*NSSAHLQGLC*ILVSILTSATGL 153
           H A W N +TQ   L ++ S     + + LC + + +  S   L
Sbjct: 43  HVAQWINLVTQQHGLPEVPSSRFLMNGKALCLMSLGMFLSRVPL 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,300
Number of Sequences: 336
Number of extensions: 3155
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)