Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0633
         (597 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    26   0.32 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.3  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   9.2  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   9.2  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 267 TNAQRTGICLPCHQTFSKIQ 208
           +NA + G C P  +T SKIQ
Sbjct: 17  SNAYKQGFCQPTQRTMSKIQ 36


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = -1

Query: 444 SGTISSSLYNIFVRAR*Q*VHKDSFRLRNCICFLTWESTASQPVQGILAS 295
           S T++  LYNI          +++F+L    C   W S  S+P + I +S
Sbjct: 340 STTVNPLLYNIMSNK-----FREAFKLMLPNCCGKWSSQKSEPRRSIYSS 384


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 226 DFFKDSAVSNQSQVPTLDPRAS 161
           DFFKDS+   Q      DP AS
Sbjct: 339 DFFKDSSFRIQHHFFYPDPLAS 360


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 54  IIGTSQDLFVEFVSSPAGPLLNTGF 128
           I+    DL  EF+ +P GP ++ GF
Sbjct: 490 IVEEELDLQFEFILAPKGP-VSLGF 513


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,682
Number of Sequences: 438
Number of extensions: 3716
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)