Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0632
(624 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53339| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_49914| Best HMM Match : DUF640 (HMM E-Value=1.1) 30 1.8
SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20) 29 2.3
SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_58553| Best HMM Match : rve (HMM E-Value=0.0011) 29 2.3
SB_41383| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 29 3.1
SB_7016| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_5424| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.1
SB_52513| Best HMM Match : MAGP (HMM E-Value=0.12) 29 4.1
SB_50443| Best HMM Match : NinG (HMM E-Value=5.6) 29 4.1
SB_43687| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_30013| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_25038| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08) 29 4.1
SB_47174| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076) 28 5.4
SB_3464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_58307| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_37231| Best HMM Match : TadE (HMM E-Value=4.5) 28 5.4
SB_25685| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_46120| Best HMM Match : Transformer (HMM E-Value=3.2) 28 7.1
SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_22145| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_19217| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_17834| Best HMM Match : Phage_attach (HMM E-Value=4) 28 7.1
SB_49744| Best HMM Match : Tubulin_C (HMM E-Value=6.7) 28 7.1
SB_39012| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_32204| Best HMM Match : wnt (HMM E-Value=8.2e-31) 28 7.1
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_37964| Best HMM Match : Bowman-Birk_leg (HMM E-Value=4.5) 27 9.4
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 27 9.4
>SB_53339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 894
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 7 GRVCLDDGKLRVVEGLGKFLKTPINSPYVY 96
G+V + G+ VV G G+F+ TP S Y+Y
Sbjct: 356 GKVVYEGGEFHVVRGSGRFIPTPPFSHYMY 385
>SB_49914| Best HMM Match : DUF640 (HMM E-Value=1.1)
Length = 647
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -1
Query: 465 RAVKLVRLRSGLIRFRPGLIRFLPEPGGLAARRVADANRSLGVESFSLFADREGGVLQVP 286
R L RL+SG I + ++ GL A ++ RSLG+ DR G LQ+P
Sbjct: 126 RVTLLARLKSGAISLLGKISPYVYHTTGLLA---SNYFRSLGIPCLLYIDDRHNGQLQIP 182
>SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20)
Length = 524
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +2
Query: 320 KRLKDSTPRLRFASATRRAASPPGSGRNRIKPGRNRIKPDRSR 448
+R K STP R RR+ PP R+R P R+R P R R
Sbjct: 462 RRTKKSTPPRRSRHPPRRSRHPP--RRSRHPPRRSRHPPRRQR 502
>SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +2
Query: 296 KTPPSLSAKRLKDSTPRLRFASATRRAASPPGSGRNRIKPGRNRIKPDRSRTSFTARARC 475
+T PS S + T + R AAS G G R + G RSR++ T+R R
Sbjct: 216 RTRPSPSTASSANETNESGRTTHARTAASARGRGNRRGRTGTRSSTRGRSRSTATSRGRT 275
Query: 476 QS 481
++
Sbjct: 276 RT 277
>SB_58553| Best HMM Match : rve (HMM E-Value=0.0011)
Length = 1745
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 73 PINSPYVYGEQNLSHADHDLLEPLSRDSPDRGEGSSVPTDLALVNKH 213
P+ P +G + L+ H+ + PD G+G +V +AL+ H
Sbjct: 331 PVTDPSGHGGERLAERRHNGRDCRRYGQPDSGDGEAVLLKMALMRSH 377
>SB_41383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1995
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +2
Query: 308 SLSAKRLKDSTPRLRFASATRRAASPPGSGRNRIKPGRNRIKPDRSRTSFTARARCQSTC 487
S++ KR +T S T SPP + +KP N+ K ++ S A +R +S
Sbjct: 565 SVAKKRAAKTTLSKDENSETADQPSPPATTTASLKPQNNKQKDSSNKNSTKATSRKKSKV 624
Query: 488 EKIFSSTK 511
+ I S TK
Sbjct: 625 QSI-SHTK 631
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 119 PTTTCSSR*AGTPPIGGRVPPCQPTWPW 202
PT +C S+ +GT +GG P WPW
Sbjct: 247 PTGSCGSKPSGTRIVGGTEAPVN-GWPW 273
>SB_7016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 489 KKSLVPRNI*LHILCSTNRPDYEIQR 566
KK PR LH+LCS R +E+ +
Sbjct: 359 KKQKTPRGTALHLLCSVGRDSFELSK 384
>SB_5424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 58 KFLKTPINSPYVYGEQNLSHADHDL-LEPLSRD 153
K ++T +N+PYV+ N++H D D+ LE L R+
Sbjct: 264 KMIRT-VNTPYVFCASNVTHFDDDIDLERLVRE 295
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 95 TGSRIYRTPTTTCSSR*AGTPPIGGRVPPCQPTWPW 202
T + I + P+ +C S+ +GT +GG P WPW
Sbjct: 199 TRAPITQPPSGSCGSKPSGTRIVGGTEAPVN-GWPW 233
>SB_52513| Best HMM Match : MAGP (HMM E-Value=0.12)
Length = 1020
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 430 DPVPSGFDPVPTRARRTCRPAGCGR 356
+P P+ DP P +R C AGC R
Sbjct: 519 NPYPTQRDPYPGAGKRPCSDAGCHR 543
>SB_50443| Best HMM Match : NinG (HMM E-Value=5.6)
Length = 477
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 430 DPVPSGFDPVPTRARRTCRPAGCGR 356
+P P+ DP P +R C AGC R
Sbjct: 33 NPYPTQRDPYPGAGKRPCSDAGCHR 57
>SB_43687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 336 RHQDFGSRPQPAGRQVLRALVGTGSNPD 419
RHQ + S+P P+ ++ +ALV G D
Sbjct: 523 RHQGYTSKPAPSHHEIQQALVDIGDKKD 550
>SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Frame = +1
Query: 139 PLSRDSPDRGEGSSVPTDLALVNKHLEGLSVTSSGCSTPTGRKMR--DPMQRDLQNSTFS 312
P PDR ++ PT ++H + + PT R + Q D +
Sbjct: 55 PTHDTQPDRPRHAARPTHDTQPDQHTTHSQTDTRHAARPTNDTARPTNDTQPDRHTTRSQ 114
Query: 313 ISKETEGLDTKTSVRVRNPPGGKSSGLW*EPDQTRTEPDQ 432
+K +T+ + R N ++ +PDQ T+PDQ
Sbjct: 115 TNKRHSQTNTRYATRPTNDTDRPTNDT--QPDQYTTQPDQ 152
>SB_30013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 430 DPVPSGFDPVPTRARRTCRPAGCGR 356
+P P+ DP P +R C AGC R
Sbjct: 31 NPYPTQRDPYPGAGKRPCSDAGCHR 55
>SB_25038| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1643
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 469 RPCREASAAPVRFDPVPSGFDPVPTRARRTCRPAGCGREPKSW 341
+P +A P+ P+P PT+ R+T A +P+SW
Sbjct: 1561 QPITDAEGNPIAKAPIPVKPKKKPTKGRKTPPVAKAKPKPRSW 1603
>SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08)
Length = 399
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 133 LEPLSRDSPDRGEGS---SVPTDLALVNKHLEGLSVTSSGCSTPTGRKMRDPMQRDL 294
L P +PD + VPT L + N + T++G +T +GR +R P + D+
Sbjct: 343 LRPHHHFAPDESLNAPKPDVPTPLDIPNAATHAIGPTATGYTTRSGRPVRAPDRLDI 399
>SB_47174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 22 DDGKLRVVEGLGKFLKTPINSPYVYGEQNLSHADHDLLEPLSRDSPDRG 168
D L V+E + KF SPY++G + H DH L+ L++ +G
Sbjct: 566 DHELLAVIEAIKKF------SPYIHGRKVFIHTDHAALQFLAKAKDFQG 608
>SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
Length = 1269
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 298 NSTFSISKETEGLDTKTSVRVRNPPGGKSSGLW*EPDQTRTEPDQTGP 441
N+ S + +G D + R GG+ G + +PDQ R + + GP
Sbjct: 146 NNRDSNDRWKQGQDERGQEAGRRDQGGEDRGTYRKPDQGRADRTERGP 193
>SB_3464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1462
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 430 DPVPSGFDPVPTRARRTCRPAGCGR 356
+P P+ DP P +R C AGC R
Sbjct: 169 NPYPTQRDPYPGAGKRFCSDAGCHR 193
>SB_58307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -3
Query: 310 RRWSFASPSAWGPSFSVRSGCYSRMTSRSDLRDACSPGPGRLARRNPP 167
++ + SPS W P YSR + + ++CSPG + R PP
Sbjct: 130 QKMHYLSPSTWFP--------YSRNSRLEKISNSCSPGDPLVLERPPP 169
>SB_37231| Best HMM Match : TadE (HMM E-Value=4.5)
Length = 361
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 430 DPVPSGFDPVPTRARRTCRPAGCGR 356
+P P+ DP P +R C AGC R
Sbjct: 90 NPYPTQRDPYPGARKRPCSDAGCHR 114
>SB_25685| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 430 DPVPSGFDPVPTRARRTCRPAGCGR 356
+P P+ DP P +R C AGC R
Sbjct: 258 NPYPTQRDPYPGARKRPCSDAGCHR 282
>SB_46120| Best HMM Match : Transformer (HMM E-Value=3.2)
Length = 436
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +2
Query: 275 TPCRGTCKTPPSLSAKRLKDSTPRLRFASATRRAASPPGSGRNRIKPGRNRIKPDRSRTS 454
+P R + P + + +TP R A+ T + S NR G D RT
Sbjct: 152 SPMRSQQRVSPGIISVNRLPATPARRPAAVTPSRSPRSASRTNRRSQGPVPSPRDDLRTR 211
Query: 455 FTARARCQSTC 487
RAR +TC
Sbjct: 212 GNTRARRPATC 222
>SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 618 YQKVLPYFAHNITELINDVEFHSQVGSCYIKYVTK 514
YQ + P NIT + + +V +CY +++TK
Sbjct: 290 YQNIHPNDLENITRYHKILVYKGRVNTCYYRFLTK 324
>SB_22145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 430 DPVPSGFDPVPTRARRTCRPAGCGR 356
+P P+ DP P +R C AGC R
Sbjct: 33 NPHPTQRDPYPGAGKRPCSDAGCHR 57
>SB_19217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 430 DPVPSGFDPVPTRARRTCRPAGCGR 356
+P P+ DP P +R C AGC R
Sbjct: 31 NPYPTQRDPHPGAGKRPCSDAGCHR 55
>SB_17834| Best HMM Match : Phage_attach (HMM E-Value=4)
Length = 438
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 430 DPVPSGFDPVPTRARRTCRPAGCGR 356
+P P+ DP P +R C AGC R
Sbjct: 56 NPYPTQRDPHPGTGKRPCSDAGCHR 80
>SB_49744| Best HMM Match : Tubulin_C (HMM E-Value=6.7)
Length = 370
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 278 GSLIFRP-VGVLQPDDVTLRPSRCLFTRARSVGT 180
G+ +FR L+ DD +R C+F R R VGT
Sbjct: 158 GAFLFRSSFSRLRVDDTRIRKKGCVFKRKRYVGT 191
>SB_39012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 277 GPSFSVRSGCY-SRMTSRSDLRDACSPGPGRLARRNPP 167
G + ++SGC R + + L ++CSPG + R PP
Sbjct: 26 GANVVIQSGCARKRARAEAALSNSCSPGDPLVLERPPP 63
>SB_32204| Best HMM Match : wnt (HMM E-Value=8.2e-31)
Length = 731
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 259 RSGCYSRMTSRSDLRDACSPGPGRLARRNPP 167
R+GC+ R T+R+ P G ARR P
Sbjct: 147 RNGCHERKTTRTQTLSLIKPSSGPTARRIVP 177
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 362 ATRRAASPPGSGRNRIKPGRNRIKPDRSRTSFTARAR 472
A R + P GR+ KPG ++ RSRTS ++R+R
Sbjct: 615 ARGRGFNDPTRGRHIFKPG--SLRRSRSRTSLSSRSR 649
>SB_37964| Best HMM Match : Bowman-Birk_leg (HMM E-Value=4.5)
Length = 506
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -1
Query: 567 DVEFHSQVGSCYIKYVTKYFVELKIFSQVD*HRARAVKLVRLRSGLIR 424
DVE GS Y K+FV+ + +S H + L R+GL++
Sbjct: 360 DVEGTRDRGSTKTPYTVKWFVDTRPWSLALAHNEQGTPLAGSRAGLVK 407
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 202 PGPGRLARRNPPPYRGSP 149
P P R ++R PPP RG+P
Sbjct: 329 PPPSRSSQRPPPPSRGAP 346
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,079,292
Number of Sequences: 59808
Number of extensions: 488786
Number of successful extensions: 1945
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1939
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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