Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0631
         (657 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC126405-1|AAI26406.1| 1613|Homo sapiens low density lipoprotein...    33   0.68 
BC117136-1|AAI17137.1| 1613|Homo sapiens low density lipoprotein...    33   0.68 
AF074264-1|AAC33006.1| 1613|Homo sapiens LDL receptor-related pr...    33   0.68 
AB209683-1|BAD92920.1| 1477|Homo sapiens low density lipoprotein...    33   0.68 
U77476-1|AAB84361.1|  295|Homo sapiens DAZLA protein protein.          31   3.6  
U66726-1|AAB39935.1|  295|Homo sapiens germline specific RNA bin...    31   3.6  
U66078-1|AAB63596.1|  295|Homo sapiens DAZLA protein.                  31   3.6  
U65918-1|AAC50813.1|  295|Homo sapiens RNA binding protein protein.    31   3.6  
BC027595-1|AAH27595.1|  295|Homo sapiens deleted in azoospermia-...    31   3.6  

>BC126405-1|AAI26406.1| 1613|Homo sapiens low density lipoprotein
            receptor-related protein 6 protein.
          Length = 1613

 Score = 33.5 bits (73), Expect = 0.68
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 180  KCATPLEI*VLRSQYSYNGCPTLQAETHYCFTAEIDGVVVPNRAD 46
            +C+ P+ + +L+ + S    PT   +   CFT EID + V  R D
Sbjct: 1227 RCSCPMHLVLLQDELSCGEPPTCSPQQFTCFTGEIDCIPVAWRCD 1271


>BC117136-1|AAI17137.1| 1613|Homo sapiens low density lipoprotein
            receptor-related protein 6 protein.
          Length = 1613

 Score = 33.5 bits (73), Expect = 0.68
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 180  KCATPLEI*VLRSQYSYNGCPTLQAETHYCFTAEIDGVVVPNRAD 46
            +C+ P+ + +L+ + S    PT   +   CFT EID + V  R D
Sbjct: 1227 RCSCPMHLVLLQDELSCGEPPTCSPQQFTCFTGEIDCIPVAWRCD 1271


>AF074264-1|AAC33006.1| 1613|Homo sapiens LDL receptor-related protein
            6 protein.
          Length = 1613

 Score = 33.5 bits (73), Expect = 0.68
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 180  KCATPLEI*VLRSQYSYNGCPTLQAETHYCFTAEIDGVVVPNRAD 46
            +C+ P+ + +L+ + S    PT   +   CFT EID + V  R D
Sbjct: 1227 RCSCPMHLVLLQDELSCGEPPTCSPQQFTCFTGEIDCIPVAWRCD 1271


>AB209683-1|BAD92920.1| 1477|Homo sapiens low density lipoprotein
            receptor-related protein 6 variant protein.
          Length = 1477

 Score = 33.5 bits (73), Expect = 0.68
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 180  KCATPLEI*VLRSQYSYNGCPTLQAETHYCFTAEIDGVVVPNRAD 46
            +C+ P+ + +L+ + S    PT   +   CFT EID + V  R D
Sbjct: 1091 RCSCPMHLVLLQDELSCGEPPTCSPQQFTCFTGEIDCIPVAWRCD 1135


>U77476-1|AAB84361.1|  295|Homo sapiens DAZLA protein protein.
          Length = 295

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 141 QYSYNGCPTLQAETHYCFTAEIDGVVVPNRADSHEALPP 25
           Q SY   P   A  ++C   +    VVPN    HEA PP
Sbjct: 200 QRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPP 238


>U66726-1|AAB39935.1|  295|Homo sapiens germline specific RNA
           binding protein protein.
          Length = 295

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 141 QYSYNGCPTLQAETHYCFTAEIDGVVVPNRADSHEALPP 25
           Q SY   P   A  ++C   +    VVPN    HEA PP
Sbjct: 200 QRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPP 238


>U66078-1|AAB63596.1|  295|Homo sapiens DAZLA protein.
          Length = 295

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 141 QYSYNGCPTLQAETHYCFTAEIDGVVVPNRADSHEALPP 25
           Q SY   P   A  ++C   +    VVPN    HEA PP
Sbjct: 200 QRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPP 238


>U65918-1|AAC50813.1|  295|Homo sapiens RNA binding protein protein.
          Length = 295

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 141 QYSYNGCPTLQAETHYCFTAEIDGVVVPNRADSHEALPP 25
           Q SY   P   A  ++C   +    VVPN    HEA PP
Sbjct: 200 QRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPP 238


>BC027595-1|AAH27595.1|  295|Homo sapiens deleted in
           azoospermia-like protein.
          Length = 295

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 141 QYSYNGCPTLQAETHYCFTAEIDGVVVPNRADSHEALPP 25
           Q SY   P   A  ++C   +    VVPN    HEA PP
Sbjct: 200 QRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPP 238


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,812,782
Number of Sequences: 237096
Number of extensions: 1869878
Number of successful extensions: 2720
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2720
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)