Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0630
(522 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-70... 192 2e-49
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657... 186 1e-47
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 176 8e-45
12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046... 143 6e-44
07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659 55 4e-08
01_06_1303 - 36132588-36132710,36133879-36134103,36134318-361347... 33 0.11
03_01_0578 + 4270835-4271482,4271763-4272140,4272353-4272444,427... 33 0.14
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 33 0.18
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 31 0.74
04_01_0576 + 7466032-7466802,7468382-7468444,7469043-7469122,746... 31 0.74
02_05_0250 + 27153048-27154453,27154546-27154885 30 1.3
02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915 29 1.7
08_02_0610 + 19307537-19308011,19308187-19310846 29 2.3
11_06_0437 - 23533218-23536382 29 3.0
08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695 28 4.0
05_04_0036 + 17386160-17386318,17386588-17386651,17387089-173871... 28 4.0
05_01_0297 - 2314687-2316021 28 4.0
10_01_0357 - 3928646-3928954 28 5.2
08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732... 28 5.2
02_05_0402 + 28687597-28687671,28688123-28688235,28688927-286894... 28 5.2
11_04_0228 + 15105752-15105921,15106774-15106919,15107369-151074... 27 6.9
08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476... 27 6.9
03_05_1012 + 29670310-29670512,29670856-29671001,29671169-296712... 27 6.9
02_05_0664 + 30717551-30719491 27 6.9
01_05_0423 + 22032940-22033695 27 6.9
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 27 9.1
06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866 27 9.1
06_01_0437 + 3101449-3101521,3101872-3102232,3103766-3103958,310... 27 9.1
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 27 9.1
04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284... 27 9.1
02_01_0363 - 2612873-2613814 27 9.1
02_01_0358 - 2575858-2576796 27 9.1
01_06_0102 - 26447286-26448107,26448248-26448385,26448990-264493... 27 9.1
>07_01_0093 +
702223-702348,703434-703556,703646-703702,703797-703871,
704105-704212
Length = 162
Score = 192 bits (467), Expect = 2e-49
Identities = 86/156 (55%), Positives = 118/156 (75%), Gaps = 3/156 (1%)
Frame = +3
Query: 54 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRGCKIVEMSTSKTGKHGHAKVH 230
M D E+ HFE+ D+GAS T+P Q +RKNG++++K R CK+VE+STSKTGKHGHAK H
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCH 60
Query: 231 LVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP- 407
VGIDIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ ++G+ ++DL++P
Sbjct: 61 FVGIDIFNGKKLEDIVPSSHNCDVPHVDRTDYQLIDISEDGFVSLLTESGNTKDDLRLPT 120
Query: 408 DGDLGTQLRTDF-NSGKELLCTVLKSCGEECVIPVK 512
D L Q++ F GK+++ TV+ + GEE + VK
Sbjct: 121 DDTLTNQIKNGFGEEGKDMILTVMSAMGEEQICAVK 156
>07_03_1141 -
24264534-24264635,24265542-24265616,24265709-24265765,
24265903-24266025,24266509-24266520,24267014-24267157,
24267606-24267626
Length = 177
Score = 186 bits (452), Expect = 1e-47
Identities = 85/159 (53%), Positives = 118/159 (74%), Gaps = 6/159 (3%)
Frame = +3
Query: 54 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRGCK----IVEMSTSKTGKHGH 218
M D E+ HFE+ D+GAS T+P Q +RKNG++++K R CK +VE+STSKTGKHGH
Sbjct: 14 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKGFGKVVEVSTSKTGKHGH 73
Query: 219 AKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDL 398
AK H V IDIFNGKK EDI PS+HN DVPHV R +YQL DIS+DG+++L+ ++G+ ++DL
Sbjct: 74 AKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDGFVSLLTESGNTKDDL 133
Query: 399 KIP-DGDLGTQLRTDFNSGKELLCTVLKSCGEECVIPVK 512
++P D L Q++T F GK+L+ TV+ + GEE + +K
Sbjct: 134 RLPTDDSLLGQIKTGFGEGKDLVVTVMSAMGEEQICALK 172
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 176 bits (429), Expect = 8e-45
Identities = 86/168 (51%), Positives = 116/168 (69%), Gaps = 15/168 (8%)
Frame = +3
Query: 54 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRGCK-------------IVEMS 191
M D E+ HFE+ D+GAS T+P Q +RKNG +++K R CK +VE+S
Sbjct: 1323 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKWSGNHASLLVDTKVVEVS 1382
Query: 192 TSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMA 371
TSKTGKHGHAK H V IDIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+
Sbjct: 1383 TSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT 1442
Query: 372 DNGDLREDLKIP-DGDLGTQLRTDFNSGKELLCTVLKSCGEECVIPVK 512
++G ++DL++P D L TQ++ F GK+L+ TV+ + GEE + +K
Sbjct: 1443 ESGGTKDDLRLPSDEALLTQIKDGFAEGKDLIVTVMSAMGEEQICALK 1490
>12_02_0477 +
19503678-19503803,19504381-19504422,19504631-19504684,
19504946-19505068,19505154-19505210,19505299-19505373,
19505925-19506026
Length = 192
Score = 143 bits (347), Expect(2) = 6e-44
Identities = 63/114 (55%), Positives = 88/114 (77%), Gaps = 1/114 (0%)
Frame = +3
Query: 174 KIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 353
K+VE+STSKTGKHGHAK H V IDIF KK EDI PS+HN DVPHV R +YQL DIS+DG
Sbjct: 74 KVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDG 133
Query: 354 YLTLMADNGDLREDLKIP-DGDLGTQLRTDFNSGKELLCTVLKSCGEECVIPVK 512
+++L+ +NG+ ++DL++P D +L +Q++ F GK+L+ TV+ + GEE + +K
Sbjct: 134 FVSLLTENGNTKDDLRLPTDDNLLSQIKDGFGEGKDLVVTVMSAMGEEQICALK 187
Score = 51.6 bits (118), Expect(2) = 6e-44
Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +3
Query: 54 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRGCK 176
M D E+ HFE+ D+GAS T+P Q +RKNG++++K R CK
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCK 42
>07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659
Length = 175
Score = 54.8 bits (126), Expect = 4e-08
Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Frame = +3
Query: 306 HVKREDYQLTDISDDG-YLTLMADNGDLREDLKIPDGD-LGTQLRTDFNSGKELLCTVLK 479
H+ R +YQL DIS+DG +++L+ ++G+ ++DL +P D L Q++T F GK+++ TV+
Sbjct: 46 HMNRTNYQLIDISEDGLFVSLLTESGNTKDDLGLPTYDNLLGQIKTGFGEGKDVVVTVMS 105
Query: 480 SCG 488
+ G
Sbjct: 106 AMG 108
>01_06_1303 -
36132588-36132710,36133879-36134103,36134318-36134713,
36135352-36135547,36135591-36135740,36135818-36135924,
36135987-36136094,36136354-36136435,36136436-36136536,
36136778-36136996,36137455-36137583,36137665-36137742,
36137816-36137929,36138071-36138230,36139224-36139441
Length = 801
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +3
Query: 15 HIIPDRC*IQNTTMGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRGCKIVEMS 191
H+ +Q ++ D E H T +ATFPM L N + +GRGCK V +S
Sbjct: 423 HVADPTSLVQPRSIIDREAMHRGTSIFLPTATFPMFPERLAMNAMSLQQGRGCKSVTVS 481
>03_01_0578 +
4270835-4271482,4271763-4272140,4272353-4272444,
4272637-4273240
Length = 573
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +1
Query: 67 KTHTSRPETPGPQPPSPCNVRPCVKTVSLC*RVGGARLLKCPHPKPESTATLKFTWLGLI 246
K + + P TP P PP P P ++L + G P + T +W L
Sbjct: 277 KLYKTSPPTPTPTPPPPAMTSP--PKLNLAAKPNGTSGTVTSTPTVKRRVTETVSWDSLP 334
Query: 247 SSMVKSMKI 273
+S++KS+K+
Sbjct: 335 TSLIKSVKV 343
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +1
Query: 94 PGPQPPSPCNVRPCVKTVSLC*RVGGARLLKCPHPKPE 207
P PQPP PC PC K C + C PKP+
Sbjct: 81 PLPQPPPPCKPPPCEKPPEDC-KPKPCHCCSCEKPKPK 117
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +3
Query: 297 DVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD 416
D P+ RE +++ ++ D Y+T D+G L ED+K+ G+
Sbjct: 38 DFPNFIREGFEVKVVTSDNYIT--RDSGLLYEDIKVGTGN 75
>04_01_0576 +
7466032-7466802,7468382-7468444,7469043-7469122,
7469505-7469622,7470035-7470067,7470400-7470474,
7470887-7471043,7471142-7471230,7472041-7472294,
7472977-7473148,7473250-7473333,7473626-7473730,
7474055-7474363,7474622-7474756,7476236-7476317,
7476423-7476502,7476622-7476783,7477071-7477138,
7478422-7478502,7478634-7478760,7478816-7478879,
7480808-7480854,7481042-7481335
Length = 1149
Score = 30.7 bits (66), Expect = 0.74
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 55 WVTSKTHTSRPETPGPQPPSPCNV 126
W+T T P+ P P PP PC+V
Sbjct: 52 WLTWPPPTPLPDAPPPPPPHPCDV 75
>02_05_0250 + 27153048-27154453,27154546-27154885
Length = 581
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +3
Query: 369 ADNGDLREDLKIPDGDLGTQLRTDFNSGKELLCTVLKSCGEECVIPVKAN 518
A GD DL IPD + TQ+ T+ S C V S G C V A+
Sbjct: 248 ASTGDRSVDLPIPDNETNTQI-TEMRSNGAEKCDVQLSGGTLCSEAVPAS 296
>02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915
Length = 1270
Score = 29.5 bits (63), Expect = 1.7
Identities = 25/94 (26%), Positives = 46/94 (48%)
Frame = -2
Query: 494 LLPAGFQHGAQQFLAAVEVSTQLCAEVTIRDFEVLTQVTVVSHQGQVAIIRDISQLVVFA 315
++ AG H ++ FLA ++ T + +E +++ VL+ +T ++ V D L V
Sbjct: 1035 MVEAGTHHTSKPFLAPLKELT-IYSESSVQSMAVLSSLTSLTRLRLV----DCDNLTV-- 1087
Query: 314 LHVGYVHVVCGGTDIFILFTIEDINPNQVNFSVA 213
VG+ V+ G +++ DI+ N SVA
Sbjct: 1088 --VGFDPVMTGSLSELVIYNKPDIDDNNHRCSVA 1119
>08_02_0610 + 19307537-19308011,19308187-19310846
Length = 1044
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 80 EVCVFDVTHCCVLNLTTVRNDM 15
+VC FD+ CC L T+ NDM
Sbjct: 835 DVCHFDLRTCCALPPATLENDM 856
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 216 HAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 353
HA LV + I N +K DI D+ H K+E Y+L + G
Sbjct: 179 HACRKLVDLVIKNKEKTADIENKEKKADIEHKKKEPYKLAIVGTGG 224
>08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695
Length = 664
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 405 PDGDLGTQLRTDFNSGKELLCTVLKSCGE 491
PDGDL ++R SGKEL L G+
Sbjct: 206 PDGDLKDKMRDAMESGKELTSNALALIGK 234
>05_04_0036 +
17386160-17386318,17386588-17386651,17387089-17387147,
17387268-17387343,17387521-17387592,17387786-17387873,
17387992-17388250,17388446-17388561,17388876-17389096,
17389196-17389224,17389285-17389420,17389567-17389651,
17389735-17389963
Length = 530
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 286 VEGQISSYFLPLKISIPTK*TLAWPCFPVLDVDI-STILHPRPFSITKPFLR 134
V ISS F K S PT+ T+ W C +L + T L PR + +L+
Sbjct: 362 VTDDISSLFWASKNSTPTRETVTWFCLLLLRQFLPGTSLDPRGLELALEYLQ 413
>05_01_0297 - 2314687-2316021
Length = 444
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +3
Query: 330 LTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFNSGKELLCTVLKSCG 488
+ D + +G L + AD D+R + DGD G +LR F S +LL V S G
Sbjct: 91 VVDCTGEGVLFVEAD-ADVRLEELEEDGDGGGELRPPFPSMDQLLLDVEGSGG 142
>10_01_0357 - 3928646-3928954
Length = 102
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +1
Query: 367 WLTTVTCVRTSKSRMVTSAHSCVLTSTAARNCCAPC*NPAGRSASSP 507
W ++ + V SA T+ A C PC NP RS P
Sbjct: 3 WAAAAAATASAAATAVASA----ATAAATERCVTPCSNPTARSIPRP 45
>08_02_0749 -
20769224-20770535,20770649-20771510,20771622-20773263,
20773357-20773701,20773858-20773952,20774218-20774344,
20774430-20774435
Length = 1462
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 156 LKGRGCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDI 275
LK + V+ TSK G+ GH KV V ++ KK D+
Sbjct: 679 LKNQDLLDVDSGTSKIGQSGHDKVEHVTNELSISKKAADV 718
>02_05_0402 +
28687597-28687671,28688123-28688235,28688927-28689432,
28689544-28689717,28689953-28690082,28692241-28692772,
28693578-28693823,28694648-28695061
Length = 729
Score = 27.9 bits (59), Expect = 5.2
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = +3
Query: 270 DICPSTHNMD---VPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTD 440
D CP T D V++ + TD +M G + GDLG+ RTD
Sbjct: 233 DQCPGTSATDSTGATCVQQAEKVSTDSDQVAKAAMMTAEGAMNFMRSTISGDLGSFPRTD 292
Query: 441 FNSGKE 458
SGKE
Sbjct: 293 AASGKE 298
>11_04_0228 +
15105752-15105921,15106774-15106919,15107369-15107448,
15107598-15107720,15107814-15107906
Length = 203
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 320 FALHVGYVHV-VCGGTDIFILFTIEDINPNQVNFSVAVLSGFGCGHFNNLA 171
F+L GYV V G +F F + NP+ + + G GC + LA
Sbjct: 52 FSLETGYVEVNESTGVQLFYYFVRSEKNPDLDPLLLWLTGGPGCSSISGLA 102
>08_02_0733 +
20546072-20546325,20546924-20547017,20547441-20547624,
20547722-20547831,20548328-20548423,20548525-20548679,
20548743-20548986,20549159-20549314,20549600-20549829,
20552213-20552316,20552420-20552505,20552776-20553066,
20553383-20553475,20553640-20553735,20553838-20553939,
20554196-20554266,20554784-20555035,20555786-20556529,
20557038-20557119,20557192-20557347,20557446-20557655,
20558282-20558665
Length = 1397
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 87 GDSGASATFPMQCSALRKNGFVMLKGRGCKIVEMSTSKTGKHGHAKVHLVGID 245
G SG+ + + SA+ ++ F + + K+VEM ++ K + KVH G D
Sbjct: 543 GTSGSKCS--LWLSAIVRHMFTLYDFKLAKLVEMESALEDKSKNVKVHAEGYD 593
>03_05_1012 +
29670310-29670512,29670856-29671001,29671169-29671245,
29671329-29671451,29671558-29671660,29672100-29672173,
29672249-29672329,29672411-29672563,29672780-29672881
Length = 353
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 320 FALHVGYVHVV-CGGTDIFILFTIEDINPNQVNFSVAVLSGFGCGHFNNLA 171
F L GY+ + GT++F F + NP+ + ++ G C F+ LA
Sbjct: 63 FYLETGYIGIEEKTGTELFYYFVESETNPDTDPLVLWLVGGPRCSAFSGLA 113
>02_05_0664 + 30717551-30719491
Length = 646
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 210 HGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHV 311
HG+ L+ D+ G D+ HNM++ H+
Sbjct: 385 HGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHI 418
>01_05_0423 + 22032940-22033695
Length = 251
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 61 TSKTHTSRPETPGPQPPSPCNVRPC 135
TS T T+ P P P PP P + + C
Sbjct: 17 TSNTSTTPPPQPPPPPPPPPHPQAC 41
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 339 ISDDGYLTLMADNGDLREDLKIP 407
+ DDG + M NGD RE LK P
Sbjct: 92 VKDDGVINSMTRNGDRRELLKGP 114
>06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866
Length = 785
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -3
Query: 259 LPLKISIPTK*TLAWPCFPVLDVDISTILHPRPFSITKPFLRRA 128
L L +++PT+ + VL D+STI + P +TK F+ R+
Sbjct: 204 LQLALNVPTEESSLTFGDRVLKNDLSTIRNDSPLLLTKTFMHRS 247
>06_01_0437 +
3101449-3101521,3101872-3102232,3103766-3103958,
3104051-3104848,3104997-3105143,3106024-3106377
Length = 641
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 372 QPSGSGSHHPRYQSVGSLRASRGVRPCCVWR 280
+PSG+ + P Q +L +RG R C VWR
Sbjct: 22 RPSGTANQSPNSQIGQTL--TRGPRTCAVWR 50
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 64 SKTHTSRPETPGPQPPSPCNVRP 132
S +SRP +PGP+P +P VRP
Sbjct: 308 SSAPSSRPSSPGPRPRAP--VRP 328
>04_04_0465 +
25427065-25427113,25428099-25428227,25428387-25428479,
25428681-25428953,25429037-25429288,25429735-25430118,
25430243-25430483,25431986-25432736
Length = 723
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 4 PVGHISFLTVVKFKTQQWVTSKTHTSRPETPGPQP-PSPCNVRPCVK 141
P+G S T+ + W + H+ P P P P+P RP ++
Sbjct: 18 PLGTASSTTIASYLLGLWSRAHRHSLPAPAPAPAPAPAPETHRPGIR 64
>02_01_0363 - 2612873-2613814
Length = 313
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 46 TQQWVTSKTHTSRPETPGPQPPSPC 120
+ +W + +P P P PPSPC
Sbjct: 96 SDKWEVGDNYLWQPLPPPPPPPSPC 120
>02_01_0358 - 2575858-2576796
Length = 312
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 46 TQQWVTSKTHTSRPETPGPQPPSPC 120
+ +W + +P P P PPSPC
Sbjct: 96 SDKWEVGDNYLWQPLPPPPPPPSPC 120
>01_06_0102 -
26447286-26448107,26448248-26448385,26448990-26449359,
26449505-26449606,26449696-26449788,26449934-26450181,
26451088-26451274,26451825-26452043,26452464-26452660,
26453545-26453875,26454099-26454457,26455141-26455240,
26455349-26455464,26455547-26455663,26455782-26455880,
26456057-26456131,26456205-26456286,26457724-26457763,
26458685-26458769,26458924-26459055
Length = 1303
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -2
Query: 338 ISQLVVFALHVGYVHVVCGGTD-IFILFTIEDINPNQ 231
IS L+ F G VH+V GG+D + IL++ + I+ ++
Sbjct: 126 ISCLMTFMSAAGEVHLVSGGSDGLLILWSADHIHDSR 162
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,369,617
Number of Sequences: 37544
Number of extensions: 384986
Number of successful extensions: 1550
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1532
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -