Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0630
(522 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin bi... 24 2.7
DQ974170-1|ABJ52810.1| 511|Anopheles gambiae serpin 12 protein. 23 4.7
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 23 4.7
AY553322-1|AAT36323.1| 426|Anopheles gambiae G-protein coupled ... 23 4.7
AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein. 23 6.2
AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein. 23 6.2
AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein. 23 6.2
AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein. 23 6.2
AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein. 23 6.2
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 8.2
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 23 8.2
>AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin
binding protein protein.
Length = 567
Score = 24.2 bits (50), Expect = 2.7
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Frame = +1
Query: 64 SKTHTSRPETPGPQPPSPCNVRPCVKTVSLC*RVGGARLLK---CPHPKPESTATLKFTW 234
SK TS P P P PSP + ++ R L K P P S + + +
Sbjct: 45 SKMPTSYPSLPAPIVPSPGAPIQQSRPQAVTVRSSAPMLPKGGLPPKGVPSSASPVYMSP 104
Query: 235 LGLISSMVKSMKISVPPHTTWTYPT*SAK 321
+ + S+ + VPP PT A+
Sbjct: 105 ASSLMTKATSLPLGVPPFRPIPKPTPEAE 133
>DQ974170-1|ABJ52810.1| 511|Anopheles gambiae serpin 12 protein.
Length = 511
Score = 23.4 bits (48), Expect = 4.7
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 264 YEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD 416
Y+D+ + ++V ++R DY + L + ++ E+ PDGD
Sbjct: 65 YKDVLEQNYAVEVRDIERNDYNFDEPKTS--LDPVVVEEEIIEESNGPDGD 113
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 23.4 bits (48), Expect = 4.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 76 TSRPETPGPQPPSPCNVRPCVKTVSL 153
+ R +TPG PPS VR KT+SL
Sbjct: 886 SQRVKTPGDVPPSVRKVR-ASKTLSL 910
>AY553322-1|AAT36323.1| 426|Anopheles gambiae G-protein coupled
receptor 4 protein.
Length = 426
Score = 23.4 bits (48), Expect = 4.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 111 FPMQCSALRKNGFVMLKG 164
+P++ SA RK G +ML G
Sbjct: 181 YPLRVSAARKRGKIMLGG 198
>AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.0 bits (47), Expect = 6.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 372 DNGDLREDLKIPDGD 416
+ GD ED+ PDGD
Sbjct: 60 EEGDYTEDVTAPDGD 74
>AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.0 bits (47), Expect = 6.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 372 DNGDLREDLKIPDGD 416
+ GD ED+ PDGD
Sbjct: 60 EEGDYTEDVTAPDGD 74
>AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.0 bits (47), Expect = 6.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 372 DNGDLREDLKIPDGD 416
+ GD ED+ PDGD
Sbjct: 60 EEGDYTEDVTAPDGD 74
>AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein.
Length = 187
Score = 23.0 bits (47), Expect = 6.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 372 DNGDLREDLKIPDGD 416
+ GD ED+ PDGD
Sbjct: 60 EEGDYTEDVTAPDGD 74
>AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.0 bits (47), Expect = 6.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 372 DNGDLREDLKIPDGD 416
+ GD ED+ PDGD
Sbjct: 60 EEGDYTEDVTAPDGD 74
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 22.6 bits (46), Expect = 8.2
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 282 STHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFNSGKEL 461
ST+N +P++ TD++D + MA +GD DL + + + SG +
Sbjct: 166 STNNSVLPYITESP---TDLTDAPTTSNMAASGD-ETDLDAITTLAESGIPSSNTSGDDR 221
Query: 462 LCTVLKSCGEECVI 503
+ +L S E+C I
Sbjct: 222 VDHLLPSPAEQCRI 235
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 22.6 bits (46), Expect = 8.2
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 282 STHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFNSGKEL 461
ST+N +P++ TD++D + MA +GD DL + + + SG +
Sbjct: 167 STNNSVLPYITESP---TDLTDAPTTSNMAASGD-ETDLDAITTLAESGIPSSNTSGDDR 222
Query: 462 LCTVLKSCGEECVI 503
+ +L S E+C I
Sbjct: 223 VDHLLPSPAEQCRI 236
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,609
Number of Sequences: 2352
Number of extensions: 12952
Number of successful extensions: 35
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -