Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0630
(522 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g13950.1 68414.m01639 eukaryotic translation initiation facto... 193 5e-50
At1g69410.1 68414.m07972 eukaryotic translation initiation facto... 188 3e-48
At1g26630.1 68414.m03243 eukaryotic translation initiation facto... 182 1e-46
At3g26570.2 68416.m03317 phosphate transporter family protein co... 33 0.15
At3g26570.1 68416.m03316 phosphate transporter family protein co... 33 0.15
At3g58930.1 68416.m06567 F-box family protein contains F-box dom... 30 0.82
At5g14230.1 68418.m01663 ankyrin repeat family protein contains ... 30 1.1
At3g46960.1 68416.m05099 DEAD/DEAH box helicase, putative simila... 29 1.4
At1g56345.1 68414.m06477 pseudouridine synthase family protein l... 29 1.4
At5g41460.1 68418.m05035 fringe-related protein strong similarit... 29 2.5
At5g03140.1 68418.m00262 lectin protein kinase family protein co... 29 2.5
At3g53330.1 68416.m05884 plastocyanin-like domain-containing pro... 28 4.4
At1g54930.1 68414.m06273 zinc knuckle (CCHC-type) family protein... 27 5.8
At5g64290.1 68418.m08076 oxoglutarate/malate translocator, putat... 27 7.7
At5g64280.1 68418.m08075 oxoglutarate/malate translocator, putat... 27 7.7
At3g51290.1 68416.m05614 proline-rich family protein 27 7.7
At3g12240.1 68416.m01527 serine carboxypeptidase S10 family prot... 27 7.7
At2g27680.1 68415.m03354 aldo/keto reductase family protein cont... 27 7.7
At1g09780.1 68414.m01097 2,3-biphosphoglycerate-independent phos... 27 7.7
>At1g13950.1 68414.m01639 eukaryotic translation initiation factor
5A-1 / eIF-5A 1 identical to SP|Q9XI91 Eukaryotic
translation initiation factor 5A-1 (eIF-5A 1)
{Arabidopsis thaliana}
Length = 158
Score = 193 bits (471), Expect = 5e-50
Identities = 84/150 (56%), Positives = 115/150 (76%), Gaps = 1/150 (0%)
Frame = +3
Query: 66 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRGCKIVEMSTSKTGKHGHAKVHLVGID 245
E+ HFE+ D+GAS T+P Q +RKNG++++K R CK+VE+STSKTGKHGHAK H V ID
Sbjct: 4 EEHHFESSDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAID 63
Query: 246 IFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD-LG 422
IF KK EDI PS+HN DVPHV R DYQL DIS+DGY++L+ DNG ++DLK+P+ D L
Sbjct: 64 IFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPNDDTLL 123
Query: 423 TQLRTDFNSGKELLCTVLKSCGEECVIPVK 512
Q+++ F+ GK+L+ +V+ + GEE + +K
Sbjct: 124 QQIKSGFDDGKDLVVSVMSAMGEEQINALK 153
>At1g69410.1 68414.m07972 eukaryotic translation initiation factor
5A, putative / eIF-5A, putative strong similarity to
eukaryotic initiation factor 5A (2) (Nicotiana
plumbaginifolia) GI:19702, SP|Q9AXQ6| Eukaryotic
translation initiation factor 5A-1 (eIF-5A 1)
{Lycopersicon esculentum}
Length = 158
Score = 188 bits (457), Expect = 3e-48
Identities = 83/150 (55%), Positives = 112/150 (74%), Gaps = 1/150 (0%)
Frame = +3
Query: 66 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRGCKIVEMSTSKTGKHGHAKVHLVGID 245
++ HFE+ D+GAS T+P Q +RK G +++KGR CK+VE+STSKTGKHGHAK H V ID
Sbjct: 4 DEHHFESSDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAID 63
Query: 246 IFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLG 422
IF KK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ DNG ++DLK+P D L
Sbjct: 64 IFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDEALL 123
Query: 423 TQLRTDFNSGKELLCTVLKSCGEECVIPVK 512
TQL+ F GK+++ +V+ + GEE + +K
Sbjct: 124 TQLKNGFEEGKDIVVSVMSAMGEEQMCALK 153
>At1g26630.1 68414.m03243 eukaryotic translation initiation factor
5A, putative / eIF-5A, putative strong similariy to
SP|Q9AXQ6 Eukaryotic translation initiation factor 5A-1
(eIF-5A 1) {Lycopersicon esculentum}
Length = 159
Score = 182 bits (443), Expect = 1e-46
Identities = 80/150 (53%), Positives = 109/150 (72%), Gaps = 1/150 (0%)
Frame = +3
Query: 66 EDTHFETGDSGASATFPMQCSALRKNGFVMLKGRGCKIVEMSTSKTGKHGHAKVHLVGID 245
++ HFE +SGAS T+P +RK G +++K R CK+VE+STSKTGKHGHAK H V ID
Sbjct: 4 DEHHFEASESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAID 63
Query: 246 IFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLG 422
IF KK EDI PS+HN DVPHV R DYQL DI++DG+++L+ D+G ++DLK+P D L
Sbjct: 64 IFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTDDGLT 123
Query: 423 TQLRTDFNSGKELLCTVLKSCGEECVIPVK 512
Q+R F+ GK+++ +V+ S GEE + VK
Sbjct: 124 AQMRLGFDEGKDIVVSVMSSMGEEQICAVK 153
>At3g26570.2 68416.m03317 phosphate transporter family protein
contains Pfam profile: PF01384 phosphate transporter
family
Length = 587
Score = 32.7 bits (71), Expect = 0.15
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = -3
Query: 487 PQDFSTVHNNSLPLLKSVRNCVPRSPSGILRSSRRSP 377
P FS+V N+SL LLK+ C PRS G S + SP
Sbjct: 4 PYRFSSVRNHSL-LLKTSHLCTPRSALGCCFSPKESP 39
>At3g26570.1 68416.m03316 phosphate transporter family protein
contains Pfam profile: PF01384 phosphate transporter
family
Length = 613
Score = 32.7 bits (71), Expect = 0.15
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = -3
Query: 487 PQDFSTVHNNSLPLLKSVRNCVPRSPSGILRSSRRSP 377
P FS+V N+SL LLK+ C PRS G S + SP
Sbjct: 30 PYRFSSVRNHSL-LLKTSHLCTPRSALGCCFSPKESP 65
>At3g58930.1 68416.m06567 F-box family protein contains F-box domain
Pfam:PF00646
Length = 482
Score = 30.3 bits (65), Expect = 0.82
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Frame = -3
Query: 286 VEGQISSYFLPLK----ISIPTK*TL-AWPCFPVLDVDISTILHPRP-----FSITKPFL 137
V G I S FLP K S+ +K L W P+LD+D S LHP I + F+
Sbjct: 11 VRGHILS-FLPAKHIALTSVLSKSWLNLWKLIPILDIDDSEFLHPEEGKAERLEIRQSFV 69
Query: 136 RRAEHCMGKVAEAPESPVS-KCVSSMSP 56
+ + ++P S KC++ + P
Sbjct: 70 DFVDRVLALQDDSPIDRFSLKCITGIHP 97
>At5g14230.1 68418.m01663 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 591
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +3
Query: 396 LKIPDGDLGTQLRTDFNSGKELLCTVLKSCGEEC 497
L IPDGD T L G +C L SCG C
Sbjct: 412 LDIPDGDGYTPLMLAAREGHGHMCEYLISCGANC 445
>At3g46960.1 68416.m05099 DEAD/DEAH box helicase, putative similar to
SP|P35207 Antiviral protein SKI2 {Saccharomyces
cerevisiae}; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 1347
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Frame = +3
Query: 339 ISDDGYLTLMADNG--DLREDLKIPDGDLGTQLR----TDFNSGKELLCTV 473
+SD+ L + A G D+ +++ D DL Q++ + NSG+EL+CTV
Sbjct: 1141 MSDEALLQMPAFQGRIDVLKNIGCIDDDLVVQIKGRVACEMNSGEELICTV 1191
>At1g56345.1 68414.m06477 pseudouridine synthase family protein low
similarity to SP|P23851 Ribosomal large subunit
pseudouridine synthase C (EC 4.2.1.70) (Pseudouridylate
synthase) (Uracil hydrolyase) {Escherichia coli};
contains Pfam profile PF00849: RNA pseudouridylate
synthase
Length = 322
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -2
Query: 476 QHGAQQFLAAVEVSTQLCAEVTIRDFEVLTQ-VTVVSHQGQVAIIRDISQLVVFALHVGY 300
+HGA + AA++V L +RD E + V+V S + + + D++ ++V G
Sbjct: 176 KHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSVNSVKNESCELEDVNHVIVAE---GE 232
Query: 299 VHVVCGGTD 273
+ CGG D
Sbjct: 233 RELSCGGDD 241
>At5g41460.1 68418.m05035 fringe-related protein strong similarity
to unknown protein (pir||T13026) similarity to predicted
proteins + similar to hypothetical protein GB:AAC23643
[Arabidopsis thaliana] + weak similarity to Fringe
[Schistocerca gregaria](GI:6573138);Fringe encodes an
extracellular protein that regulates Notch signalling.
Length = 524
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 31 VVKFKTQQWVTSKTHTSRPETPGPQPPSP 117
++ F T Q K++ S P +P P PP P
Sbjct: 80 LILFHTNQTAVIKSYASPPPSPPPPPPPP 108
>At5g03140.1 68418.m00262 lectin protein kinase family protein
contains Pfam domains, PF00138: Legume lectins alpha
domain, PF00139: Legume lectins beta domain and PF00069:
Protein kinase domain
Length = 711
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 166 RPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMS 59
+P +T+P +R + A+ PE P++K SSMS
Sbjct: 631 QPDPVTRPTMRSVVQILVGEADVPEVPIAKPSSSMS 666
>At3g53330.1 68416.m05884 plastocyanin-like domain-containing
protein similar to mavicyanin SP:P80728 from [Cucurbita
pepo]
Length = 310
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/18 (72%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +1
Query: 64 SKTHT-SRPETPGPQPPS 114
SKTH SRP TP P PPS
Sbjct: 127 SKTHERSRPITPSPPPPS 144
>At1g54930.1 68414.m06273 zinc knuckle (CCHC-type) family protein
contains INTERPRO domain, IPR001878: Zn-finger CCHC type
Length = 353
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +1
Query: 67 KTHTSRPETPGPQPPS---PCNVRPCVKTVSLC*RVGGARLLKCP 192
KT T P PP PCN PC S + R CP
Sbjct: 22 KTTTKPTAAAAPSPPDIHCPCNAGPCNTVTSKTEKNPNRRFYTCP 66
>At5g64290.1 68418.m08076 oxoglutarate/malate translocator, putative
similar to SWISS-PROT:Q41364 2-oxoglutarate/malate
translocator, chloroplast precursor. [Spinach]{Spinacia
oleracea}
Length = 563
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/70 (22%), Positives = 26/70 (37%)
Frame = +1
Query: 94 PGPQPPSPCNVRPCVKTVSLC*RVGGARLLKCPHPKPESTATLKFTWLGLISSMVKSMKI 273
P P PSP K + L + +L+ P PE + L + S + + +
Sbjct: 80 PPPPSPSPSPSPQGAKLIPLILSISVGLILRFAVPVPEGVTPQGWQLLSIFLSTIAGLVL 139
Query: 274 SVPPHTTWTY 303
S P W +
Sbjct: 140 SPLPVGAWAF 149
>At5g64280.1 68418.m08075 oxoglutarate/malate translocator, putative
similar to SWISS-PROT:Q41364 2-oxoglutarate/malate
translocator, chloroplast precursor [Spinach]{Spinacia
oleracea}
Length = 549
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/75 (20%), Positives = 30/75 (40%)
Frame = +1
Query: 79 SRPETPGPQPPSPCNVRPCVKTVSLC*RVGGARLLKCPHPKPESTATLKFTWLGLISSMV 258
++P+ P P PP P K + L V +++ P+PE + + L + +
Sbjct: 65 NKPQPPPPSPPQPQG----AKLIPLAISVSIGLIVRFLIPRPEQVTSQGWQLLSIFLFTI 120
Query: 259 KSMKISVPPHTTWTY 303
+ + P W +
Sbjct: 121 SGLVLGPLPVGAWAF 135
>At3g51290.1 68416.m05614 proline-rich family protein
Length = 602
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 43 KTQQWVTSKTHTSRPETPGPQPPSP 117
+T W T+ T + P P P PP P
Sbjct: 91 ETTTWTTTTTSSVLPPPPPPPPPPP 115
>At3g12240.1 68416.m01527 serine carboxypeptidase S10 family protein
contains Pfam profile: PF00450 serine carboxypeptidase;
similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]
Length = 436
Score = 27.1 bits (57), Expect = 7.7
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -2
Query: 383 VTVVSHQGQVAIIRDISQL---VVFALHVGYVHVVCGGTD-IFILFTIEDINPNQVNFSV 216
+ ++ H +IIR + + F L GY+ V D +F F + NP + V
Sbjct: 16 LVLIQHADSSSIIRYLPGFEGPLPFELETGYIGVGQKEEDQLFYYFIKSENNPEEDPLLV 75
Query: 215 AVLSGFGCGHFNNL 174
+ G GC F+ L
Sbjct: 76 WLTGGPGCSSFSGL 89
>At2g27680.1 68415.m03354 aldo/keto reductase family protein
contains Pfam profile PF00248: oxidoreductase, aldo/keto
reductase family
Length = 384
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 267 EDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKI 404
++I S MDV + + D ++DGYL + DL+E+ KI
Sbjct: 147 QNIDISRKRMDVAALDMLQFHWWDYANDGYLDALKHLTDLKEEGKI 192
>At1g09780.1 68414.m01097 2,3-biphosphoglycerate-independent
phosphoglycerate mutase, putative /
phosphoglyceromutase, putative strong similarity to
SP|Q42908 2,3-bisphosphoglycerate-independent
phosphoglycerate mutase (EC 5.4.2.1)
(Phosphoglyceromutase) {Mesembryanthemum crystallinum};
contains Pfam profile PF01676: Metalloenzyme superfamily
Length = 557
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 520 VFALTGMTHSSPQDFSTVHNNSLPLLKSVRNCVP 419
V L G S+P ++ +HN P + S+++ P
Sbjct: 23 VIVLDGWGESAPDQYNCIHNAPTPAMDSLKHGAP 56
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,646,257
Number of Sequences: 28952
Number of extensions: 286506
Number of successful extensions: 957
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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