Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0629
         (663 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    24   1.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    24   1.1  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    24   1.1  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   2.0  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   2.6  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   4.5  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   4.5  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 616 TPKRIDKPWGFLYYFRI*MVKRSHGPT 536
           T K I  PW + Y +   + ++S+G T
Sbjct: 164 TGKNITTPWDYYYIYHTLVAEQSYGLT 190


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 616 TPKRIDKPWGFLYYFRI*MVKRSHGPT 536
           T K I  PW + Y +   + ++S+G T
Sbjct: 179 TGKNITTPWDYYYIYHTLVAEQSYGLT 205


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 616 TPKRIDKPWGFLYYFRI*MVKRSHGPT 536
           T K I  PW + Y +   + ++S+G T
Sbjct: 67  TGKNITTPWDYYYIYHTLVAEQSYGLT 93


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 261 ILWWSWYSFIPG 296
           +LWW W +F  G
Sbjct: 230 VLWWGWLAFNSG 241


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +2

Query: 65  LVLHTLYY-STALLLAETSLRATEATNR 145
           LV H  +  STA LLA+  L++TE T R
Sbjct: 103 LVPHMAWQLSTAHLLAQLFLKSTEVTPR 130


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 429 WTMFLHSFQTSTQWIATLMLESNVVL 352
           WT+  H+F+ ST     L +   +VL
Sbjct: 215 WTLIEHAFEISTMLFFVLPMTIIIVL 240


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 548 RSLDHLNSKVIQKPPRLVNSF 610
           +++ H   KV+ KPP +  SF
Sbjct: 124 KAILHHTGKVVWKPPAIYKSF 144


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,621
Number of Sequences: 438
Number of extensions: 4723
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)